RNA–Protein interactions for RNA: ENST00000564096.1

CLK3-214, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 805 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-214ENST00000564096 SLC22A4Q9H015 551 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 POFUT1Q9H488 388 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 OCEL1Q9H607 264 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 TMEM138Q9NPI0 162 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 CA10Q9NS85 328 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 PTTG2Q9NZH5 202 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 CRIM1Q9NZV1 1036 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 SLC7A11Q9UPY5 501 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 CMAHPQ9Y471 501 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 MYO7BQ6PIF6 2116 aa11.02□□□□□ -0.65
CLK3-214ENST00000564096 CFAP46Q8IYW2 2715 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 TRAV8-7A0A075B6U6 113 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 WIPF3A6NGB9 483 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 TRIM64BA6NI03 449 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 IQCF6A8MYZ5 107 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 PYCARD-AS1I3L0S3 204 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 LMX1BO60663 402 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 CST4P01036 141 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 NRASP01111 189 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 MAS1P04201 325 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 HCKP08631 526 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 IGFBP3P17936 291 aaPredicted RBP11.01□□□□□ -0.65
CLK3-214ENST00000564096 IGFBP2P18065 325 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 KITLGP21583 273 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 PRKACBP22694 351 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 BDKRB2P30411 391 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 MAGEB1P43366 347 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 RORCP51449 518 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 HNRNPA0Q13151 305 aaKnown RBP11.01□□□□□ -0.65
CLK3-214ENST00000564096 DDI2Q5TDH0 399 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 PLCXD3Q63HM9 321 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 OR2T2Q6IF00 324 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 DMRTC2Q8IXT2 367 aaPredicted RBP11.01□□□□□ -0.65
CLK3-214ENST00000564096 PNLDC1Q8NA58 520 aaKnown RBP11.01□□□□□ -0.65
CLK3-214ENST00000564096 SYNPRQ8TBG9 265 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 FOXRED1Q96CU9 486 aaPredicted RBP11.01□□□□□ -0.65
CLK3-214ENST00000564096 HAVCR1Q96D42 359 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 PIK3IP1Q96FE7 263 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 HIST1H2AAQ96QV6 131 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 GPR160Q9UJ42 338 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 PURGQ9UJV8 347 aaKnown RBP11.01□□□□□ -0.65
CLK3-214ENST00000564096 MPC1Q9Y5U8 109 aa11.01□□□□□ -0.65
CLK3-214ENST00000564096 ZNF462Q96JM2 2506 aa11□□□□□ -0.65
CLK3-214ENST00000564096 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11□□□□□ -0.65
CLK3-214ENST00000564096 PLSCR5A0PG75 271 aa11□□□□□ -0.65
CLK3-214ENST00000564096 NOTOA8MTQ0 251 aa11□□□□□ -0.65
CLK3-214ENST00000564096 PRSS44E7EML9 344 aa11□□□□□ -0.65
CLK3-214ENST00000564096 ALX3O95076 343 aa11□□□□□ -0.65
CLK3-214ENST00000564096 ZNF250P15622 560 aa11□□□□□ -0.65
CLK3-214ENST00000564096 ATF1P18846 271 aa11□□□□□ -0.65
CLK3-214ENST00000564096 AZGP1P25311 298 aaKnown RBP11□□□□□ -0.65
CLK3-214ENST00000564096 FABP6P51161 128 aa11□□□□□ -0.65
CLK3-214ENST00000564096 CAPZA1P52907 286 aa11□□□□□ -0.65
CLK3-214ENST00000564096 PRSS12P56730 875 aa11□□□□□ -0.65
CLK3-214ENST00000564096 MZT1Q08AG7 82 aa11□□□□□ -0.65
CLK3-214ENST00000564096 TMEM42Q69YG0 159 aa11□□□□□ -0.65
CLK3-214ENST00000564096 ZNF529Q6P280 563 aa11□□□□□ -0.65
CLK3-214ENST00000564096 SFXN4Q6P4A7 337 aa11□□□□□ -0.65
CLK3-214ENST00000564096 MEX3BQ6ZN04 569 aaKnown RBP11□□□□□ -0.65
CLK3-214ENST00000564096 LHFPL2Q6ZUX7 228 aa11□□□□□ -0.65
CLK3-214ENST00000564096 LRRTM1Q86UE6 522 aa11□□□□□ -0.65
CLK3-214ENST00000564096 BHLHE23Q8NDY6 225 aa11□□□□□ -0.65
CLK3-214ENST00000564096 DYNC2LI1Q8TCX1 351 aa11□□□□□ -0.65
CLK3-214ENST00000564096 UBASH3BQ8TF42 649 aa11□□□□□ -0.65
CLK3-214ENST00000564096 TMEM171Q8WVE6 324 aa11□□□□□ -0.65
CLK3-214ENST00000564096 PIGCQ92535 297 aa11□□□□□ -0.65
CLK3-214ENST00000564096 MRPL24Q96A35 216 aaKnown RBP11□□□□□ -0.65
CLK3-214ENST00000564096 ORAI1Q96D31 301 aa11□□□□□ -0.65
CLK3-214ENST00000564096 ADAT1Q9BUB4 502 aaKnown RBP11□□□□□ -0.65
CLK3-214ENST00000564096 MRI1Q9BV20 369 aa11□□□□□ -0.65
CLK3-214ENST00000564096 PPIL3Q9H2H8 161 aaKnown RBP11□□□□□ -0.65
CLK3-214ENST00000564096 TPK1Q9H3S4 243 aa11□□□□□ -0.65
CLK3-214ENST00000564096 PLGRKTQ9HBL7 147 aa11□□□□□ -0.65
CLK3-214ENST00000564096 GPR173Q9NS66 373 aa11□□□□□ -0.65
CLK3-214ENST00000564096 CYSLTR2Q9NS75 346 aa11□□□□□ -0.65
CLK3-214ENST00000564096 V9GY05 133 aa11□□□□□ -0.65
CLK3-214ENST00000564096 SMG1Q96Q15 3661 aaKnown RBP10.99□□□□□ -0.65
CLK3-214ENST00000564096 HIVEP3Q5T1R4 2406 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 A6NIN4 97 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 DEFB108AA8MXU0 73 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 AIPO00170 330 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 ZNF182P17025 639 aaPredicted RBP10.99□□□□□ -0.65
CLK3-214ENST00000564096 RPS19P39019 145 aaKnown RBP10.99□□□□□ -0.65
CLK3-214ENST00000564096 MPV17P39210 176 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 PSG7Q13046 419 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 PRDX4Q13162 271 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 TNK1Q13470 666 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 KRT74Q7RTS7 529 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 CDH26Q8IXH8 852 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 OR5AS1Q8N127 324 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 JAGN1Q8N5M9 183 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 DNAAF1Q8NEP3 725 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 OR8G5Q8NG78 346 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 OR6M1Q8NGM8 313 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 OR8S1Q8NH09 359 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 KCTD12Q96CX2 325 aaKnown RBP10.99□□□□□ -0.65
CLK3-214ENST00000564096 BORCS8Q96FH0 119 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 SORCS2Q96PQ0 1159 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 MICU1Q9BPX6 476 aa10.99□□□□□ -0.65
CLK3-214ENST00000564096 UQCC2Q9BRT2 126 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms