RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 SNTNA6NMZ2 147 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 CEACAM18A8MTB9 384 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 H0YAE9 185 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 ZNF593O00488 134 aaPredicted RBP13.21□□□□□ -0.29
RNF40-205ENST00000563909 GPR37O15354 613 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 SGCEO43556 437 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 CD55P08174 381 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 ADH4P08319 380 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 COX5BP10606 129 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 STOMP27105 288 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 CAPGP40121 348 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 MDH2P40926 338 aaKnown RBP13.21□□□□□ -0.29
RNF40-205ENST00000563909 FGF12P61328 243 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 GNB2P62879 340 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 HIST1H3AP68431 136 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 ADARB1P78563 741 aaKnown RBP13.21□□□□□ -0.29
RNF40-205ENST00000563909 TNFAIP6P98066 277 aaPredicted RBP13.21□□□□□ -0.29
RNF40-205ENST00000563909 TMED1Q13445 227 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 PCK2Q16822 640 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 HIST2H3PS2Q5TEC6 136 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 SLC18B1Q6NT16 456 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 LYPD4Q6UWN0 246 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 Q6ZTK2 550 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 HIST2H3AQ71DI3 136 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 SHFQ7M4L6 423 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 BCDIN3DQ7Z5W3 292 aaKnown RBP13.21□□□□□ -0.29
RNF40-205ENST00000563909 ERI1Q8IV48 349 aaKnown RBP13.21□□□□□ -0.29
RNF40-205ENST00000563909 ZNF101Q8IZC7 436 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 SETD9Q8NE22 299 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 OR6N2Q8NGY6 317 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 AKR7LQ8NHP1 331 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 DACT3Q96B18 629 aaPredicted RBP13.21□□□□□ -0.29
RNF40-205ENST00000563909 MARS2Q96GW9 593 aaKnown RBP13.21□□□□□ -0.29
RNF40-205ENST00000563909 Q96MT0 163 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 ADI1Q9BV57 179 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 MSL2Q9HCI7 577 aa13.21□□□□□ -0.29
RNF40-205ENST00000563909 WARS2Q9UGM6 360 aaKnown RBP13.21□□□□□ -0.29
RNF40-205ENST00000563909 CCDC182A6NF36 153 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 TNFRSF13BO14836 293 aaPredicted RBP13.2□□□□□ -0.3
RNF40-205ENST00000563909 RER1O15258 196 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 DOK2O60496 412 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 SPARCP09486 303 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 LIPAP38571 399 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 GDI2P50395 445 aaKnown RBP13.2□□□□□ -0.3
RNF40-205ENST00000563909 IL18R1Q13478 541 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 CCDC92Q53HC0 331 aaPredicted RBP13.2□□□□□ -0.3
RNF40-205ENST00000563909 MBNL2Q5VZF2 373 aaKnown RBP13.2□□□□□ -0.3
RNF40-205ENST00000563909 ZNF774Q6NX45 483 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 CORO6Q6QEF8 472 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 UNQ6126/PRO20091Q6UXV3 157 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 GDPGP1Q6ZNW5 385 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 LINC00346Q8IVM7 164 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 TIGD4Q8IY51 512 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 ENTHD1Q8IYW4 607 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 ZNF283Q8N7M2 679 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 SLC25A40Q8TBP6 338 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 PHF21AQ96BD5 680 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 ZNF582Q96NG8 517 aaPredicted RBP13.2□□□□□ -0.3
RNF40-205ENST00000563909 CLN6Q9NWW5 311 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 HAO2Q9NYQ3 351 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 EIF3KQ9UBQ5 218 aaKnown RBP13.2□□□□□ -0.3
RNF40-205ENST00000563909 ATPIF1Q9UII2 106 aa13.2□□□□□ -0.3
RNF40-205ENST00000563909 XPNPEP2O43895 674 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 RPS2P15880 293 aaKnown RBP13.19□□□□□ -0.3
RNF40-205ENST00000563909 GABRB1P18505 474 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 HTR1FP30939 366 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 WNT5AP41221 380 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 IER3P46695 156 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 HTR5AP47898 357 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 AQP4P55087 323 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 IL5RAQ01344 420 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 ZNF691Q5VV52 312 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 VASH1Q7L8A9 365 aaPredicted RBP13.19□□□□□ -0.3
RNF40-205ENST00000563909 SLC16A9Q7RTY1 509 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 MUC20Q8N307 709 aaPredicted RBP13.19□□□□□ -0.3
RNF40-205ENST00000563909 ZNF454Q8N9F8 522 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 OR1F12Q8NHA8 337 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 RHOXF1Q8NHV9 184 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 KLF14Q8TD94 323 aaPredicted RBP13.19□□□□□ -0.3
RNF40-205ENST00000563909 POM121L2Q96KW2 1035 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 NUDT16L1Q9BRJ7 211 aaKnown RBP13.19□□□□□ -0.3
RNF40-205ENST00000563909 PCGF1Q9BSM1 259 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 OR2J1Q9GZK6 312 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 YIPF3Q9GZM5 350 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 HDHD2Q9H0R4 259 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 DNAJC27Q9NZQ0 273 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 CGGBP1Q9UFW8 167 aaPredicted RBP13.19□□□□□ -0.3
RNF40-205ENST00000563909 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.19□□□□□ -0.3
RNF40-205ENST00000563909 HSPE1-MOB4S4R3N1 261 aa13.19□□□□□ -0.3
RNF40-205ENST00000563909 C5orf49A4QMS7 147 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 SELENOFO60613 162 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 ENTPD6O75354 484 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 VHLP40337 213 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 RPS27P42677 84 aaKnown RBP13.18□□□□□ -0.3
RNF40-205ENST00000563909 HSPA13P48723 471 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 COL10A1Q03692 680 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 POU4F2Q12837 409 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 ECH1Q13011 328 aa13.18□□□□□ -0.3
RNF40-205ENST00000563909 EIF2B1Q14232 305 aaKnown RBP13.18□□□□□ -0.3
RNF40-205ENST00000563909 HERPUD1Q15011 391 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms