RNA–Protein interactions for RNA: ENST00000563781.5

HERPUD1-207, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 774 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-207ENST00000563781 DAZAP2Q15038 168 aaPredicted RBP4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 BEX5Q5H9J7 111 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 ELFN2Q5R3F8 820 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 RBM48Q5RL73 367 aaKnown RBP4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 NCMAPQ5T1S8 102 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 HIST2H2BCQ6DN03 193 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 KRT80Q6KB66 452 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 ZNF322Q6U7Q0 402 aaPredicted RBP4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 LRRN1Q6UXK5 716 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 COLCA1Q6ZS62 124 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 AHSA2Q719I0 299 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 SSX8Q7RTT4 187 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 PRSS45Q7RTY3 260 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 ZNF786Q8N393 782 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 ZNF485Q8NCK3 441 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 SLC30A7Q8NEW0 376 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 Q8NFD4 153 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 GJC3Q8NFK1 279 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 OR10H4Q8NGA5 316 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 OR2AJ1Q8NGZ0 328 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 OR2T27Q8NH04 317 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 OR1F12Q8NHA8 337 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 THEM6Q8WUY1 208 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 ASB17Q8WXJ9 295 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 NEUROG1Q92886 237 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 ATF6BQ99941 703 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 TTTY10Q9BZA0 68 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 KCNN2Q9H2S1 579 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 C1orf198Q9H425 327 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 MOV10Q9HCE1 1003 aaKnown RBP4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 CENPMQ9NSP4 180 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 SLCO1C1Q9NYB5 712 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 PLEK2Q9NYT0 353 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 KCNN3Q9UGI6 736 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 LAMP5Q9UJQ1 280 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 FBXL3Q9UKT7 428 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 DIMT1Q9UNQ2 313 aaKnown RBP4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 LRP12Q9Y561 859 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 TMEM14AQ9Y6G1 99 aa4.47□□□□□ -1.69
HERPUD1-207ENST00000563781 ICE1Q9Y2F5 2266 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 A0A0B4J203 849 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 IQCMA0A1B0GVH7 501 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 DAPL1A0PJW8 107 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 IRGMA1A4Y4 181 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 UBE2QL1A1L167 161 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 C5orf49A4QMS7 147 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 A6NNC1 897 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 SHISA9B4DS77 424 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 ATP6V1G2-DDX39BF2Z307 99 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 M0R135 149 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 PSMD9O00233 223 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 PHYHO14832 338 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 ZNF254O75437 659 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 FADS2O95864 444 aaKnown RBP4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 PLAUP00749 431 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 PTHP01270 115 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 CDK1P06493 297 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 H2BFMP0C1H6 154 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 PTAFRP25105 342 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 STOMP27105 288 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 DCKP27707 260 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 C21orf33P30042 268 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 PPIFP30405 207 aaKnown RBP4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 APLNRP35414 380 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 GDI2P50395 445 aaKnown RBP4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 PRKXP51817 358 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 CSNK2BP67870 215 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 BSPH1Q075Z2 132 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 MFGE8Q08431 387 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 ST3GAL4Q11206 333 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 ECH1Q13011 328 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 ICAM4Q14773 271 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 TBC1D28Q2M2D7 210 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 KCTD21Q4G0X4 260 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 CDONQ4KMG0 1287 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 TP53I3Q53FA7 332 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 KLHL22Q53GT1 634 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 TMEM255AQ5JRV8 349 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 RNLSQ5VYX0 342 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 SP5Q6BEB4 398 aaPredicted RBP4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 DEGS2Q6QHC5 323 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 FIP1L1Q6UN15 594 aaKnown RBP4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 TMEM108Q6UXF1 575 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 PLEKHG7Q6ZR37 379 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 RFPL4BQ6ZWI9 263 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 RHOUQ7L0Q8 258 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 LHFPL3Q86UP9 236 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 NAA40Q86UY6 237 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 ZNF679Q8IYX0 411 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 ZNF101Q8IZC7 436 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 CMTM4Q8IZR5 234 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 SPARTQ8N0X7 666 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 ACBD7Q8N6N7 88 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 ZNF540Q8NDQ6 660 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 KBTBD8Q8NFY9 601 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 OR52N1Q8NH53 320 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 Q8TCH9 128 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 PIK3IP1Q96FE7 263 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 ZNF799Q96GE5 643 aa4.46□□□□□ -1.7
HERPUD1-207ENST00000563781 TMEM80Q96HE8 168 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms