RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 DHRS3O75911 302 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 IGHV4-31P0DP07 118 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 CCL1P22362 96 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 GNALP38405 381 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 OR12D2P58182 307 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 MVKQ03426 396 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 AVPI1Q5T686 147 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 ZBTB37Q5TC79 503 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 PRAMEF6Q5VXH4 476 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 Q6ZSR3 168 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 THAP5Q7Z6K1 395 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 PEG10Q86TG7 708 aaKnown RBP14.1□□□□□ -0.15
CLK3-207ENST00000562389 MOGAT3Q86VF5 341 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 SYS1Q8N2H4 156 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 SEMA6DQ8NFY4 1073 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 OR8S1Q8NH09 359 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 CLDND2Q8NHS1 167 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 ZNF420Q8TAQ5 688 aaPredicted RBP14.1□□□□□ -0.15
CLK3-207ENST00000562389 Q8TCH9 128 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 RNF166Q96A37 237 aaPredicted RBP14.1□□□□□ -0.15
CLK3-207ENST00000562389 FAM71F1Q96KD3 344 aaPredicted RBP14.1□□□□□ -0.15
CLK3-207ENST00000562389 C4orf36Q96KX1 117 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 C14orf119Q9NWQ9 140 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 SLC22A13Q9Y226 551 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 MPC1Q9Y5U8 109 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 NPTNQ9Y639 398 aa14.1□□□□□ -0.15
CLK3-207ENST00000562389 IGHV3-64DA0A0J9YX35 117 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 LOC100289279A0A1B0GTE1 492 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 A0A1B0GTI1 187 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 DHRS7CA6NNS2 312 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 TMEM178BH3BS89 294 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 WNT9BO14905 357 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 IGHV2-70P01814 119 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 DCKP27707 260 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 PSMB10P40306 273 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 GZMKP49863 264 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 RIPPLY1Q0D2K3 151 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 HNRNPA0Q13151 305 aaKnown RBP14.09□□□□□ -0.15
CLK3-207ENST00000562389 PRDX4Q13162 271 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 WDR38Q5JTN6 314 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 C6orf52Q5T4I8 152 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 LAIR2Q6ISS4 152 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 FDX2Q6P4F2 183 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 DOK3Q7L591 496 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 LHFPL3Q86UP9 236 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 PRSS35Q8N3Z0 413 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 ITPKCQ96DU7 683 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 PELI1Q96FA3 418 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 C1orf159Q96HA4 380 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 V9GYS6 101 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 ABCA1O95477 2261 aa14.09□□□□□ -0.15
CLK3-207ENST00000562389 LRRC30A6NM36 301 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 ANXA2P2A6NMY6 339 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 J3QLW9 94 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 P2RY10O00398 339 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 HTR1AP08908 422 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 PIPP12273 146 aaPredicted RBP14.08□□□□□ -0.16
CLK3-207ENST00000562389 ZNF19P17023 458 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 IL2RGP31785 369 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 PMELP40967 661 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 KIR3DL2P43630 455 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 MPPED2Q15777 294 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 CYB5R2Q6BCY4 276 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 C1orf87Q8N0U7 546 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 CCDC54Q8NEL0 328 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 OR14K1Q8NGZ2 314 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 OR2G2Q8NGZ5 317 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 PIGCQ92535 297 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 NARFLQ9H6Q4 476 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 PPP1R3EQ9H7J1 279 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 FN3KRPQ9HA64 309 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 ENPP5Q9UJA9 477 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 DIMT1Q9UNQ2 313 aaKnown RBP14.08□□□□□ -0.16
CLK3-207ENST00000562389 PIGLQ9Y2B2 252 aa14.08□□□□□ -0.16
CLK3-207ENST00000562389 ZNF850A8MQ14 1090 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 FSTL3O95633 263 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 CYB5R3P00387 301 aaPredicted RBP14.07□□□□□ -0.16
CLK3-207ENST00000562389 UBCP0CG48 685 aaKnown RBP14.07□□□□□ -0.16
CLK3-207ENST00000562389 LIMS3P0CW19 117 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 LIMS4P0CW20 117 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 RBMXP38159 391 aaKnown RBP14.07□□□□□ -0.16
CLK3-207ENST00000562389 HSPA13P48723 471 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 CCR9P51686 369 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 BTG1P62324 171 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 MRPL28Q13084 256 aaKnown RBP14.07□□□□□ -0.16
CLK3-207ENST00000562389 IZUMO2Q6UXV1 221 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 WDR86Q86TI4 376 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 ZDHHC23Q8IYP9 409 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 OR11L1Q8NGX0 322 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 HAVCR2Q8TDQ0 301 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 HPSE2Q8WWQ2 592 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 OR5P3Q8WZ94 311 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 GGHQ92820 318 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 MICU1Q9BPX6 476 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 RTL8AQ9BWD3 113 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 ISG20L2Q9H9L3 353 aaKnown RBP14.07□□□□□ -0.16
CLK3-207ENST00000562389 PLCXD1Q9NUJ7 323 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 UFSP2Q9NUQ7 469 aa14.07□□□□□ -0.16
CLK3-207ENST00000562389 CNOT2Q9NZN8 540 aaKnown RBP14.07□□□□□ -0.16
CLK3-207ENST00000562389 RRP15Q9Y3B9 282 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms