RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 SLC2A2P11168 524 aaPredicted RBP8.89□□□□□ -0.99
USP3-219ENST00000561326 RAC2P15153 192 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 PTAFRP25105 342 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 CFPP27918 469 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 HTR2CP28335 458 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 ZNF93P35789 620 aaPredicted RBP8.89□□□□□ -0.99
USP3-219ENST00000561326 TALDO1P37837 337 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 WNT5AP41221 380 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 NAAAQ02083 359 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 TLE1Q04724 770 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 RIN1Q13671 783 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 ZNF718Q3SXZ3 478 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 C1orf100Q5SVJ3 147 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 TMEM108Q6UXF1 575 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 FBXW12Q6X9E4 464 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 LRRC28Q86X40 367 aaPredicted RBP8.89□□□□□ -0.99
USP3-219ENST00000561326 ZNF101Q8IZC7 436 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 PAQR4Q8N4S7 273 aaPredicted RBP8.89□□□□□ -0.99
USP3-219ENST00000561326 DNAAF1Q8NEP3 725 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 PIGCQ92535 297 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 PIGTQ969N2 578 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 SPSB1Q96BD6 273 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 DIRAS2Q96HU8 199 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 WDFY2Q96P53 400 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 HIST1H2AAQ96QV6 131 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 GPER1Q99527 375 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 SOX7Q9BT81 388 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 CHST5Q9GZS9 411 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 OR51B6Q9H340 312 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 ETV7Q9Y603 341 aa8.89□□□□□ -0.99
USP3-219ENST00000561326 KALRNO60229 2985 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 IGHV2OR16-5A0A0B4J2B6 119 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 FABP12A6NFH5 140 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 CD300LBA8K4G0 201 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 VSTM5A8MXK1 200 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 B8ZZF3 427 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 HPGDSO60760 199 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 SMPD2O60906 423 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 CST4P01036 141 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 APOA1P02647 267 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 PRF1P14222 555 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 ACKR3P25106 362 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 GCH1P30793 250 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 THBS2P35442 1172 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 EVX1P49640 407 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 FUT6P51993 359 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 HLXQ14774 488 aaPredicted RBP8.88□□□□□ -0.99
USP3-219ENST00000561326 FAM189A2Q15884 450 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 TMEM42Q69YG0 159 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 ASPHD2Q6ICH7 369 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 XKRXQ6PP77 449 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 METAP1DQ6UB28 335 aaPredicted RBP8.88□□□□□ -0.99
USP3-219ENST00000561326 MOB3CQ70IA8 216 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 SAMD12Q8N8I0 201 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 OR52N4Q8NGI2 321 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 OR51A2Q8NGJ7 313 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 TRMT10AQ8TBZ6 339 aaKnown RBP8.88□□□□□ -0.99
USP3-219ENST00000561326 PHF21AQ96BD5 680 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 HAVCR1Q96D42 359 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 CMBLQ96DG6 245 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 S100A16Q96FQ6 103 aaKnown RBP8.88□□□□□ -0.99
USP3-219ENST00000561326 CCDC120Q96HB5 630 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 S100A13Q99584 98 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 GFI1Q99684 422 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 METTL17Q9H7H0 456 aaPredicted RBP8.88□□□□□ -0.99
USP3-219ENST00000561326 LIN7BQ9HAP6 207 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 RABL2AQ9UBK7 228 aaPredicted RBP8.88□□□□□ -0.99
USP3-219ENST00000561326 RABL2BQ9UNT1 228 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 NOP16Q9Y3C1 178 aaKnown RBP8.88□□□□□ -0.99
USP3-219ENST00000561326 MPC1Q9Y5U8 109 aa8.88□□□□□ -0.99
USP3-219ENST00000561326 LOC100289279A0A1B0GTE1 492 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 FAM90A27PA6NNH2 459 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 UBBP0CG47 229 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 SNRPBP14678 240 aaKnown RBP8.87□□□□□ -0.99
USP3-219ENST00000561326 ARSBP15848 533 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 AGAP20933 346 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 GNLYP22749 145 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 ANOS1P23352 680 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 AZGP1P25311 298 aaKnown RBP8.87□□□□□ -0.99
USP3-219ENST00000561326 CD40P25942 277 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 PTBP1P26599 531 aaKnown RBP eCLIP8.87□□□□□ -0.994e-8■■■■■ 64.1
USP3-219ENST00000561326 CD40LGP29965 261 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 PEX19P40855 299 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 ETV6P41212 452 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 RBP2P50120 134 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 ART1P52961 327 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 ATP1B3P54709 279 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 MTCP1P56278 107 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 SELENOVP59797 346 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 RPS23P62266 143 aaKnown RBP8.87□□□□□ -0.99
USP3-219ENST00000561326 ADORA2A-AS1P86434 159 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 TNK1Q13470 666 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 P2RY14Q15391 338 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 KISS1Q15726 138 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 UBE2V2Q15819 145 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 C2orf76Q3KRA6 126 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 UBE2NLQ5JXB2 153 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 PLCXD3Q63HM9 321 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 LHFPL2Q6ZUX7 228 aa8.87□□□□□ -0.99
USP3-219ENST00000561326 RFPL4BQ6ZWI9 263 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms