RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CCDC182A6NF36 153 aa14.3□□□□□ -0.12
CDC42BPB-208ENST00000561271 GYPAP02724 150 aa14.3□□□□□ -0.12
CDC42BPB-208ENST00000561271 ACKR3P25106 362 aa14.3□□□□□ -0.12
CDC42BPB-208ENST00000561271 GNALP38405 381 aa14.3□□□□□ -0.12
CDC42BPB-208ENST00000561271 KCNJ8Q15842 424 aa14.3□□□□□ -0.12
CDC42BPB-208ENST00000561271 CSNK2A3Q8NEV1 391 aa14.3□□□□□ -0.12
CDC42BPB-208ENST00000561271 C1orf147Q96MC9 270 aaPredicted RBP14.3□□□□□ -0.12
CDC42BPB-208ENST00000561271 MS4A7Q9GZW8 240 aaPredicted RBP14.3□□□□□ -0.12
CDC42BPB-208ENST00000561271 RGCCQ9H4X1 137 aa14.3□□□□□ -0.12
CDC42BPB-208ENST00000561271 LAMP5Q9UJQ1 280 aa14.3□□□□□ -0.12
CDC42BPB-208ENST00000561271 KIR2DS1A0A191URI9 304 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 TMEM89A2RUT3 159 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 PRR32B1ATL7 298 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 PSMD9O00233 223 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 ENSAO43768 121 aaKnown RBP14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 PRKYO43930 277 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 MITFO75030 526 aaPredicted RBP14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 FCN3O75636 299 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 PPIAL4GP0DN37 164 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 ALOX5APP20292 161 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 CFPP27918 469 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 NPY4RP50391 375 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 FGF12P61328 243 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 ELF3P78545 371 aaPredicted RBP14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 POU4F2Q12837 409 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 ATP6AP1Q15904 470 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 WDR82Q6UXN9 313 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 KRT77Q7Z794 578 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 C11orf53Q8IXP5 236 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 OR1M1Q8NGA1 313 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 OR5K1Q8NHB7 308 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 ITPKCQ96DU7 683 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 LYZL4Q96KX0 146 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 RASSF4Q9H2L5 321 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 TRIM36Q9NQ86 728 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 ERVK-18Q9QC07 812 aa14.29□□□□□ -0.12
CDC42BPB-208ENST00000561271 MDFIC2A0A1B0GVS7 189 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 A0A1B0GW55 424 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 ANXA2P2A6NMY6 339 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 TNFRSF13BO14836 293 aaPredicted RBP14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 PLATP00750 562 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 LHBP01229 141 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 DUX4L2P0CJ85 424 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 DUX4L3P0CJ86 424 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 DUX4L4P0CJ87 422 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 DUX4L5P0CJ88 424 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 DUX4L6P0CJ89 424 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 DUX4L7P0CJ90 424 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 PRDX4Q13162 271 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 PTGES3Q15185 160 aaKnown RBP14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 LCN1P1Q5VSP4 162 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 TEX36Q5VZQ5 186 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 DUX4L9Q6RFH8 374 aaPredicted RBP14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 BRD3OSQ6XYD6 125 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 KRT84Q9NSB2 600 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 DUX4Q9UBX2 424 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 COPS3Q9UNS2 423 aa14.28□□□□□ -0.12
CDC42BPB-208ENST00000561271 ZNF850A8MQ14 1090 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 SFTPBP07988 381 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 EPHA2P29317 976 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 COMPP49747 757 aaPredicted RBP14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 BAMBIQ13145 260 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 C1orf146Q5VVC0 180 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 BCDIN3DQ7Z5W3 292 aaKnown RBP14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 FGFRL1Q8N441 504 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 FTMTQ8N4E7 242 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 HPSE2Q8WWQ2 592 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 SEH1LQ96EE3 360 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 CNN2Q99439 309 aaKnown RBP14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 TEAD3Q99594 435 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 PKP2Q99959 881 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 MICU1Q9BPX6 476 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 PCGF1Q9BSM1 259 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 RTL8AQ9BWD3 113 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 YIPF3Q9GZM5 350 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 FGF23Q9GZV9 251 aaPredicted RBP14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 NIPAL2Q9H841 368 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 RNPEPL1Q9HAU8 725 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 FAM206AQ9NX38 181 aa14.27□□□□□ -0.13
CDC42BPB-208ENST00000561271 DVL1O14640 695 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 CDIPTO14735 213 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 TMPRSS2O15393 492 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 NDUFA2O43678 99 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 PRTN3P24158 256 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 CFHR2P36980 270 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 GMFBP60983 142 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 ESRRGP62508 458 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 IL5RAQ01344 420 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 SNCBQ16143 134 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 WDR38Q5JTN6 314 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 C9orf139Q6ZV77 190 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 AMIGO2Q86SJ2 522 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 FAM81AQ8TBF8 368 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 ST8SIA4Q92187 359 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 PIGCQ92535 297 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 RPL3LQ92901 407 aaKnown RBP14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 PRRG3Q9BZD7 231 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 GABARAPL1Q9H0R8 117 aa14.26□□□□□ -0.13
CDC42BPB-208ENST00000561271 TLNRD1Q9H1K6 362 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms