RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 RIPK1Q13546 671 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 ZNF181Q2M3W8 571 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 WDR38Q5JTN6 314 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 PRAMEF6Q5VXH4 476 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 FAM220AQ7Z4H9 259 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 C8orf59Q8N0T1 100 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 ZNF420Q8TAQ5 688 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 Q8TCH9 128 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 ITFG2Q969R8 447 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 JAM3Q9BX67 310 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 FGF20Q9NP95 211 aaPredicted RBP13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 INPP5EQ9NRR6 644 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 TMEM160Q9NX00 188 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 GNG8Q9UK08 70 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 SLC22A13Q9Y226 551 aa13.06□□□□□ -0.32
RABGGTA-219ENST00000560871 IGHV3-64DA0A0J9YX35 117 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 DHRS3O75911 302 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 ATP6V1G2O95670 118 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 FADS2O95864 444 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 CST4P01036 141 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 IGHV2-70P01814 119 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 ZNF16P17020 682 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 PSMB10P40306 273 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 PMELP40967 661 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 GZMKP49863 264 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 OR12D2P58182 307 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 ACTA2P62736 377 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 ACTG2P63267 376 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 MVKQ03426 396 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 GALEQ14376 348 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 MPPED2Q15777 294 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 SNCBQ16143 134 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 ZNF771Q7L3S4 317 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 WDR86Q86TI4 376 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 MOGAT3Q86VF5 341 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 PRSS35Q8N3Z0 413 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 FTMTQ8N4E7 242 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 SPERTQ8NA61 448 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 HPSE2Q8WWQ2 592 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 HPS1Q92902 700 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 ITPKCQ96DU7 683 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 C1orf159Q96HA4 380 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 FAM71F1Q96KD3 344 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 C4orf36Q96KX1 117 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 ALG8Q9BVK2 526 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 PAPOLGQ9BWT3 736 aaKnown RBP13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 FGF23Q9GZV9 251 aaPredicted RBP13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 NARFLQ9H6Q4 476 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 ERVK13-1Q9NX77 482 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 GTF2A1LQ9UNN4 478 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 NPTNQ9Y639 398 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 V9GYS6 101 aa13.05□□□□□ -0.32
RABGGTA-219ENST00000560871 ZNF816-ZNF321PA0A0X1KG74 233 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 TMEM178BH3BS89 294 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 IFNL4K9M1U5 179 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 KIR3DL2P43630 455 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 MAP2K3P46734 347 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 KLHL22Q53GT1 634 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 ZBTB37Q5TC79 503 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 FDX2Q6P4F2 183 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 KCTD20Q7Z5Y7 419 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 LHFPL3Q86UP9 236 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 COMMD2Q86X83 199 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 SYS1Q8N2H4 156 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 OR14K1Q8NGZ2 314 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 RAB1CQ92928 201 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 ERGIC1Q969X5 290 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 PELI1Q96FA3 418 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 TIMD4Q96H15 378 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 MPC1Q9Y5U8 109 aa13.04□□□□□ -0.32
RABGGTA-219ENST00000560871 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 P2RY10O00398 339 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 CYB5R3P00387 301 aaPredicted RBP13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 LIMS3P0CW19 117 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 LIMS4P0CW20 117 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 GNALP38405 381 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 NANOS3P60323 173 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 LMO4P61968 165 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 BTG1P62324 171 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 PRDX4Q13162 271 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 CHRFAM7AQ494W8 412 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 DOK3Q7L591 496 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 THAP5Q7Z6K1 395 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 SEMA6DQ8NFY4 1073 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 OR2G2Q8NGZ5 317 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 MSI2Q96DH6 328 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 MDFIQ99750 246 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 ISG20L2Q9H9L3 353 aaKnown RBP13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 ABCB9Q9NP78 766 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 ABCA2Q9BZC7 2435 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 MALRD1Q5VYJ5 2156 aa13.03□□□□□ -0.32
RABGGTA-219ENST00000560871 DHRS7CA6NNS2 312 aa13.02□□□□□ -0.33
RABGGTA-219ENST00000560871 ZNF850A8MQ14 1090 aa13.02□□□□□ -0.33
RABGGTA-219ENST00000560871 J3QLW9 94 aa13.02□□□□□ -0.33
RABGGTA-219ENST00000560871 MTRF1O75570 445 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-219ENST00000560871 FSTL3O95633 263 aa13.02□□□□□ -0.33
RABGGTA-219ENST00000560871 IGHV2-5P01817 119 aa13.02□□□□□ -0.33
RABGGTA-219ENST00000560871 UBCP0CG48 685 aaKnown RBP13.02□□□□□ -0.33
RABGGTA-219ENST00000560871 PIPP12273 146 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-219ENST00000560871 FAHP16930 419 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms