RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 C14orf28Q4W4Y0 310 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 CLLU1OSQ5K130 101 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 UNQ6126/PRO20091Q6UXV3 157 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 BAP18Q8IXM2 172 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 OR1L6Q8NGR2 347 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 OR8D1Q8WZ84 308 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 NRGNQ92686 78 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 TNFRSF14Q92956 283 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 PPCDCQ96CD2 204 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 SLC25A38Q96DW6 304 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 KIRREL1Q96J84 757 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 AKR1E2Q96JD6 320 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 ZNF514Q96K75 400 aaPredicted RBP5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 YPEL4Q96NS1 127 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 DEFB118Q96PH6 123 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 GFI1Q99684 422 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 WWTR1Q9GZV5 400 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 OR10A2Q9H208 303 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 TMEM38AQ9H6F2 299 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 ZNF230Q9UIE0 474 aaPredicted RBP5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 PITPNC1Q9UKF7 332 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 VWA8A3KMH1 1905 aa5.95□□□□□ -1.46
TSPAN3-209ENST00000560715 A0A1W2PPQ1 181 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 PRSS37A4D1T9 235 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 TMEM202A6NGA9 273 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 BCHEP06276 602 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 FCGR3AP08637 254 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 AMD1P17707 334 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 HTR2CP28335 458 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 OPRD1P41143 372 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 SULT1A1P50225 295 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 ZNF84P51523 738 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 CDH11P55287 796 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 CDK3Q00526 305 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 ZNF234Q14588 700 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 IHHQ14623 411 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 JOSD1Q15040 202 aaPredicted RBP5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 RHEBQ15382 184 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 ODF4Q2M2E3 257 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 NOXRED1Q6NXP6 359 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 FAM159AQ6UWV7 190 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 GDPD4Q6W3E5 623 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 TPGS1Q6ZTW0 290 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 RD3Q7Z3Z2 195 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 LHFPL4Q7Z7J7 247 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 MRGPREQ86SM8 312 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 THOC6Q86W42 341 aaKnown RBP5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 SERPINA9Q86WD7 417 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 ZNF283Q8N7M2 679 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 LMNTD1Q8N9Z9 388 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 TERB2Q8NHR7 220 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 ABHD4Q8TB40 342 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 PIGCQ92535 297 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 IRF7Q92985 503 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 APOLD1Q96LR9 279 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 LINC00597Q9H2U6 94 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 SLC2A4RGQ9NR83 387 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 COMMD9Q9P000 198 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 ZNF337Q9Y3M9 751 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 GREB1Q4ZG55 1949 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 TRAV1-2A0A0B4J238 106 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 A0A1B0GTI1 187 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 A0A1W2PS29 197 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 H7C417 338 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 SLC16A5O15375 505 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 LDB3O75112 727 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 SYNGR4O95473 234 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 H1F0P07305 194 aaKnown RBP5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 SLC35G4P0C7Q5 338 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 DAOP14920 347 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 FABP4P15090 132 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 GCSHP23434 173 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 CD80P33681 288 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 FAUP35544 74 aaKnown RBP5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 GDF5P43026 501 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 RPS10P46783 165 aaKnown RBP5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 DVL1P1P54792 670 aaPredicted RBP5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 CTSL3PQ5NE16 218 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 FBXW9Q5XUX1 488 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 HIST2H3AQ71DI3 136 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 SLC16A9Q7RTY1 509 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 CD163Q86VB7 1156 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 FOXRED2Q8IWF2 684 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 OR7G2Q8NG99 324 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 OR6N1Q8NGY5 312 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 M1APQ8TC57 530 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 NPRL2Q8WTW4 380 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 UBTD2Q8WUN7 234 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 APOBEC4Q8WW27 367 aaKnown RBP5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 TMEM45BQ96B21 275 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 MOB3AQ96BX8 217 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 SMIM8Q96KF7 97 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 PACRGQ96M98 296 aaPredicted RBP5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 OR5B2Q96R09 309 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 SPATA25Q9BR10 227 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 SLITRK2Q9H156 845 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 SYT4Q9H2B2 425 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 ISG20L2Q9H9L3 353 aaKnown RBP5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 NT5MQ9NPB1 228 aa5.94□□□□□ -1.46
TSPAN3-209ENST00000560715 KLHL28Q9NXS3 571 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms