RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 PRB3Q04118 309 aaPredicted RBP8.14□□□□□ -1.11
TPM1-225ENST00000560679 MAB21L1Q13394 359 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 PRAMEF6Q5VXH4 476 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 OTPQ5XKR4 325 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 XAF1Q6GPH4 301 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 C1orf94Q6P1W5 598 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 C1orf122Q6ZSJ8 110 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 SYT9Q86SS6 491 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 NKAIN4Q8IVV8 208 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 KLHDC1Q8N7A1 406 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 BHLHE23Q8NDY6 225 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 OR9Q2Q8NGE9 314 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 OR13G1Q8NGZ3 307 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 OR52J3Q8NH60 311 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 PPP1R35Q8TAP8 253 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 TMEM255BQ8WV15 326 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 SGCDQ92629 289 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 PTP4A1Q93096 173 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 C12orf43Q96C57 262 aaKnown RBP8.14□□□□□ -1.11
TPM1-225ENST00000560679 DUSP21Q9H596 190 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 NMNAT1Q9HAN9 279 aaPredicted RBP8.14□□□□□ -1.11
TPM1-225ENST00000560679 PAK1IP1Q9NWT1 392 aaPredicted RBP8.14□□□□□ -1.11
TPM1-225ENST00000560679 PTTG3PQ9NZH4 202 aa8.14□□□□□ -1.11
TPM1-225ENST00000560679 IQCF6A8MYZ5 107 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 H7C1C5 153 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 FFAR1O14842 300 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 SGCEO43556 437 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 RGS10O43665 173 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 XPNPEP2O43895 674 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 OR10H3O60404 316 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 WBP4O75554 376 aaKnown RBP8.13□□□□□ -1.11
TPM1-225ENST00000560679 MPIG6BO95866 241 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 MT-ND2P03891 347 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 FBP1P09467 338 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 NR2C1P13056 603 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 TGFBR2P37173 567 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 TMBIM6P55061 237 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 DLX1P56177 255 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 LCN6P62502 163 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 SLC35A2P78381 396 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 MPPED2Q15777 294 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 FGD3Q5JSP0 725 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 GPR107Q5VW38 600 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 CD276Q5ZPR3 534 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 ZNF770Q6IQ21 691 aaPredicted RBP8.13□□□□□ -1.11
TPM1-225ENST00000560679 VMO1Q7Z5L0 202 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 IGFN1Q86VF2 1251 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 ENTHD1Q8IYW4 607 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 FGFRL1Q8N441 504 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 SVOPQ8N4V2 548 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 PNLDC1Q8NA58 520 aaKnown RBP8.13□□□□□ -1.11
TPM1-225ENST00000560679 AQP11Q8NBQ7 271 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 FAM81AQ8TBF8 368 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 APH1BQ8WW43 257 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 LIPHQ8WWY8 451 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 SGTBQ96EQ0 304 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 ZNF582Q96NG8 517 aaPredicted RBP8.13□□□□□ -1.11
TPM1-225ENST00000560679 NIPSNAP1Q9BPW8 284 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 MMP28Q9H239 520 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 PPA2Q9H2U2 334 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 ERVK-18Q9QC07 812 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 HIF3AQ9Y2N7 669 aa8.13□□□□□ -1.11
TPM1-225ENST00000560679 TRBV4-1A0A0J9YWV2 114 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 MEGF11A6BM72 1044 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 ADARB2-AS1A8MUL3 147 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 RNASEK-C17orf49H0YIS7 233 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 H3BMQ9 156 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 ADAM20O43506 726 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 IGF2P01344 180 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 FPR3P25089 353 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 CD200P41217 278 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 RPL27P61353 136 aaKnown RBP8.12□□□□□ -1.11
TPM1-225ENST00000560679 SCRN3Q0VDG4 424 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 ALG10Q5BKT4 473 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 SFRP4Q6FHJ7 346 aaPredicted RBP8.12□□□□□ -1.11
TPM1-225ENST00000560679 BTN2A1Q7KYR7 527 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 LINC00471Q8N535 108 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 LRRC75AQ8NAA5 344 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 RHOXF1Q8NHV9 184 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 RAB2BQ8WUD1 216 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 PRRC1Q96M27 445 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 COG8Q96MW5 612 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 WWC2-AS2Q96NR7 200 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 FUZQ9BT04 418 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 DGCR6LQ9BY27 220 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 CCDC90BQ9GZT6 254 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 WDR76Q9H967 626 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 PLCXD1Q9NUJ7 323 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 UFSP2Q9NUQ7 469 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 RHCGQ9UBD6 479 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 AASSQ9UDR5 926 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 FAM96BQ9Y3D0 163 aa8.12□□□□□ -1.11
TPM1-225ENST00000560679 HUWE1Q7Z6Z7 4374 aaKnown RBP8.11□□□□□ -1.11
TPM1-225ENST00000560679 A0A1B0GW55 424 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 A0A1W2PRQ8 180 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 BTBD17A6NE02 478 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 ZAR1LA6NP61 321 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 PTGES3LE9PB15 166 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 J3QW42 95 aa8.11□□□□□ -1.11
TPM1-225ENST00000560679 LGALS8O00214 317 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms