RNA–Protein interactions for RNA: ENST00000560316.1

HERC1-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-207ENST00000560316 TMEM120AQ9BXJ8 343 aa13.44□□□□□ -0.26
HERC1-207ENST00000560316 NSRP1Q9H0G5 558 aaKnown RBP13.44□□□□□ -0.26
HERC1-207ENST00000560316 TMBIM4Q9HC24 238 aa13.44□□□□□ -0.26
HERC1-207ENST00000560316 MRPL22Q9NWU5 206 aaKnown RBP13.44□□□□□ -0.26
HERC1-207ENST00000560316 HAO2Q9NYQ3 351 aa13.44□□□□□ -0.26
HERC1-207ENST00000560316 NKX6-3A6NJ46 265 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 PEX14O75381 377 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 ZNF682O95780 498 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 RENP00797 406 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 NAA10P41227 235 aaPredicted RBP13.43□□□□□ -0.26
HERC1-207ENST00000560316 OMPP47874 163 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 PRKXP51817 358 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 PLA1AQ53H76 456 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 DRAM2Q6UX65 266 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 OR2T12Q8NG77 320 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 OR5D13Q8NGL4 314 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 OR4K13Q8NH42 304 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 CDCA4Q9BXL8 241 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 WNT10AQ9GZT5 417 aa13.43□□□□□ -0.26
HERC1-207ENST00000560316 GMPR2Q9P2T1 348 aaKnown RBP13.43□□□□□ -0.26
HERC1-207ENST00000560316 UNC119BA6NIH7 251 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 PF4V1P10720 104 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 PSKH1P11801 424 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 HIST1H1CP16403 213 aaKnown RBP13.42□□□□□ -0.26
HERC1-207ENST00000560316 FAHP16930 419 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 HOXD3P31249 432 aaPredicted RBP13.42□□□□□ -0.26
HERC1-207ENST00000560316 OTX1P32242 354 aaPredicted RBP13.42□□□□□ -0.26
HERC1-207ENST00000560316 RAB13P51153 203 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 SLC35A2P78381 396 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 IFI44LQ53G44 452 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 ZNF788Q6ZQV5 615 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 Q6ZS46 218 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 ZBTB46Q86UZ6 589 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 TMEM219Q86XT9 240 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 MKXQ8IYA7 352 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 RAB3IPQ96QF0 476 aaPredicted RBP13.42□□□□□ -0.26
HERC1-207ENST00000560316 RAB21Q9UL25 225 aa13.42□□□□□ -0.26
HERC1-207ENST00000560316 OR6C68A6NDL8 312 aa13.41□□□□□ -0.26
HERC1-207ENST00000560316 MRASO14807 208 aa13.41□□□□□ -0.26
HERC1-207ENST00000560316 CNN3Q15417 329 aaKnown RBP13.41□□□□□ -0.26
HERC1-207ENST00000560316 TMEM95Q3KNT9 176 aa13.41□□□□□ -0.26
HERC1-207ENST00000560316 SMARCD3Q6STE5 483 aa13.41□□□□□ -0.26
HERC1-207ENST00000560316 FAM185AQ8N0U4 392 aa13.41□□□□□ -0.26
HERC1-207ENST00000560316 ANGPTL6Q8NI99 470 aa13.41□□□□□ -0.26
HERC1-207ENST00000560316 STON2Q8WXE9 905 aa13.41□□□□□ -0.26
HERC1-207ENST00000560316 MED30Q96HR3 178 aa13.41□□□□□ -0.26
HERC1-207ENST00000560316 COPS4Q9BT78 406 aa13.41□□□□□ -0.26
HERC1-207ENST00000560316 DNTTIP1Q9H147 329 aa13.41□□□□□ -0.26
HERC1-207ENST00000560316 ANKRD19PQ9H560 264 aa13.41□□□□□ -0.26
HERC1-207ENST00000560316 OPA3Q9H6K4 179 aa13.41□□□□□ -0.26
HERC1-207ENST00000560316 TRBV23-1A0A0A0MS06 115 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 TVP23AA6NH52 213 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 SIGLEC5O15389 551 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 TBX1O43435 398 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 AKR7A2O43488 359 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 TIPRLO75663 272 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 PF4P02776 101 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 ACAA1P09110 424 aaPredicted RBP13.4□□□□□ -0.26
HERC1-207ENST00000560316 ZNF823P16415 610 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 DDOSTP39656 456 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 CAV3P56539 151 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 MXRA7P84157 204 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 FAM3AP98173 230 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 SEC23BQ15437 767 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 ARSJQ5FYB0 599 aaPredicted RBP13.4□□□□□ -0.26
HERC1-207ENST00000560316 FGD3Q5JSP0 725 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 FKBP9P1Q75LS8 142 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 SLC16A9Q7RTY1 509 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 LHFPL4Q7Z7J7 247 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 DYNAPQ8N1N2 210 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 SDR9C7Q8NEX9 313 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 RPL3LQ92901 407 aaKnown RBP13.4□□□□□ -0.26
HERC1-207ENST00000560316 SPSB4Q96A44 273 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 RCC1LQ96I51 464 aaKnown RBP13.4□□□□□ -0.26
HERC1-207ENST00000560316 HSH2DQ96JZ2 352 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 PRSS22Q9GZN4 317 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 TLNRD1Q9H1K6 362 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 TCF19Q9Y242 345 aa13.4□□□□□ -0.26
HERC1-207ENST00000560316 XRCC2O43543 280 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 H1F0P07305 194 aaKnown RBP13.39□□□□□ -0.27
HERC1-207ENST00000560316 COX7A1P24310 79 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 PYCR1P32322 319 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 GABRA2P47869 451 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 CD83Q01151 205 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 LYPD4Q6UWN0 246 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 DCXRQ7Z4W1 244 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 CYP4Z1Q86W10 505 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 ZNRF1Q8ND25 227 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 FANK1Q8TC84 345 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 CENPMQ9NSP4 180 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 KCNG2Q9UJ96 466 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 ENPP4Q9Y6X5 453 aa13.39□□□□□ -0.27
HERC1-207ENST00000560316 TRBV4-1A0A0J9YWV2 114 aa13.38□□□□□ -0.27
HERC1-207ENST00000560316 A0A1W2PRQ8 180 aa13.38□□□□□ -0.27
HERC1-207ENST00000560316 A6NDX4 124 aa13.38□□□□□ -0.27
HERC1-207ENST00000560316 VGLL3A8MV65 326 aa13.38□□□□□ -0.27
HERC1-207ENST00000560316 E9PQ18 207 aa13.38□□□□□ -0.27
HERC1-207ENST00000560316 NPPAP01160 153 aa13.38□□□□□ -0.27
HERC1-207ENST00000560316 NOS3P29474 1203 aa13.38□□□□□ -0.27
HERC1-207ENST00000560316 GNALP38405 381 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms