RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 ZG16O60844 167 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 CLPXO76031 633 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 ALX3O95076 343 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 NRASP01111 189 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 NGFP01138 241 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 IGLV3-1P01715 115 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 MAS1P04201 325 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 CELA3BP08861 270 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 EPXP11678 715 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 ZNF35P13682 527 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 RAC2P15153 192 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 PRKACBP22694 351 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 BDKRB2P30411 391 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 TGFBR1P36897 503 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 GSK3AP49840 483 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 FAM3AP98173 230 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 NAAAQ02083 359 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 ZNF92Q03936 586 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 HGFACQ04756 655 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 DYNC1I2Q13409 638 aaKnown RBP5.55□□□□□ -1.52
SPG11-221ENST00000560299 GK2Q14410 553 aaPredicted RBP5.55□□□□□ -1.52
SPG11-221ENST00000560299 CNN3Q15417 329 aaKnown RBP5.55□□□□□ -1.52
SPG11-221ENST00000560299 OR8B8Q15620 311 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 MOGQ16653 247 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 CLVS2Q5SYC1 327 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 IDNKQ5T6J7 187 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 FAM27D1Q5T7N8 215 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 SEZ6L2Q6UXD5 910 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 FBXW12Q6X9E4 464 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 UTS2BQ765I0 119 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 WFDC8Q8IUA0 241 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 CDH26Q8IXH8 852 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 PNLDC1Q8NA58 520 aaKnown RBP5.55□□□□□ -1.52
SPG11-221ENST00000560299 OR1M1Q8NGA1 313 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 OR1J1Q8NGS3 322 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 OR14K1Q8NGZ2 314 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 OR10AC1Q8NH08 325 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 OR2AE1Q8NHA4 323 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 C14orf79Q96F83 325 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 RADILQ96JH8 1075 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 LYZL4Q96KX0 146 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 CEP19Q96LK0 163 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 DACH2Q96NX9 599 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 HIST1H2AAQ96QV6 131 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 SLC22A4Q9H015 551 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 ESRP2Q9H6T0 727 aaKnown RBP5.55□□□□□ -1.52
SPG11-221ENST00000560299 PLGRKTQ9HBL7 147 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 ABCB9Q9NP78 766 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 PTTG3PQ9NZH4 202 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 ABRACLQ9P1F3 81 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 PLEKHB1Q9UF11 243 aaPredicted RBP5.55□□□□□ -1.52
SPG11-221ENST00000560299 KCNN3Q9UGI6 736 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 ADAM30Q9UKF2 790 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 SLC7A11Q9UPY5 501 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 NOP16Q9Y3C1 178 aaKnown RBP5.55□□□□□ -1.52
SPG11-221ENST00000560299 AK6Q9Y3D8 172 aaKnown RBP5.55□□□□□ -1.52
SPG11-221ENST00000560299 PEX16Q9Y5Y5 336 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 DCHS2Q6V1P9 2916 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 TEX15Q9BXT5 2789 aa5.55□□□□□ -1.52
SPG11-221ENST00000560299 A0A075B6Q4 140 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 hCG_38984A0A1B0GV85 526 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 FAM221AA4D161 298 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 NKX2-6A6NCS4 301 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 ANKRD61A6NGH8 418 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 IFITM5A6NNB3 132 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 CD300LBA8K4G0 201 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 AIPO00170 330 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 RGS5O15539 181 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 SMPD2O60906 423 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 ALDOBP05062 364 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 HCKP08631 526 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 FAM157BP0CG42 384 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 FAHP16930 419 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 IGFBP3P17936 291 aaPredicted RBP5.54□□□□□ -1.52
SPG11-221ENST00000560299 ATF1P18846 271 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 CD40P25942 277 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 CCKARP32238 428 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 GLRXP35754 106 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 ZNF93P35789 620 aaPredicted RBP5.54□□□□□ -1.52
SPG11-221ENST00000560299 WNT5AP41221 380 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 MAGEB1P43366 347 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 SCAND1P57086 179 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 MZT1Q08AG7 82 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 DAZAP2Q15038 168 aaPredicted RBP5.54□□□□□ -1.52
SPG11-221ENST00000560299 FAM189A2Q15884 450 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 RAB11BQ15907 218 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 CEP78Q5JTW2 689 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 DDI2Q5TDH0 399 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 RGS7BPQ6MZT1 257 aaPredicted RBP5.54□□□□□ -1.52
SPG11-221ENST00000560299 SFXN4Q6P4A7 337 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 SLC22A25Q6T423 547 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 ZNF101Q8IZC7 436 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 PAQR4Q8N4S7 273 aaPredicted RBP5.54□□□□□ -1.52
SPG11-221ENST00000560299 JAGN1Q8N5M9 183 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 OR13C9Q8NGT0 318 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 ZNF671Q8TAW3 534 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 S100ZQ8WXG8 99 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 PIGCQ92535 297 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 PIGTQ969N2 578 aa5.54□□□□□ -1.52
SPG11-221ENST00000560299 SPSB1Q96BD6 273 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms