RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CCDC160A6NGH7 325 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 TUBAL3A6NHL2 446 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 DEFB108AA8MXU0 73 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 SHISA9B4DS77 424 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 PRSS44E7EML9 344 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 J3QKU1 62 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 CCRL2O00421 344 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 GABRPO00591 440 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 PIN1P1O15428 100 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 OGG1O15527 345 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 ZNF254O75437 659 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 TACSTD2P09758 323 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 ZNF35P13682 527 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 FAHP16930 419 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 FPR2P25090 351 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 CD40P25942 277 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 LOXP28300 417 aaPredicted RBP4.47□□□□□ -1.69
SPG11-220ENST00000559933 CRYBB2P43320 205 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 NR1H2P55055 460 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 TPTEP56180 551 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 CAV3P56539 151 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 VBP1P61758 197 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 PPP1CBP62140 327 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 BDH1Q02338 343 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 ACSM1Q08AH1 577 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 SNTB2Q13425 540 aaKnown RBP4.47□□□□□ -1.69
SPG11-220ENST00000559933 LSAMPQ13449 338 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 TPBGQ13641 420 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 GK2Q14410 553 aaPredicted RBP4.47□□□□□ -1.69
SPG11-220ENST00000559933 SPCS2Q15005 226 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 MTFR2Q6P444 385 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 RPL22L1Q6P5R6 122 aaKnown RBP4.47□□□□□ -1.69
SPG11-220ENST00000559933 DEGS2Q6QHC5 323 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 DRAM2Q6UX65 266 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 COLCA1Q6ZS62 124 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 P2RY8Q86VZ1 359 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 NR2C2APQ86WQ0 139 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 ELMOD2Q8IZ81 293 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 BATF2Q8N1L9 274 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 LINC00482Q8N8I6 264 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 DNAAF1Q8NEP3 725 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 OR51A2Q8NGJ7 313 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 OR1J2Q8NGS2 313 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 OR13C3Q8NGS6 347 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 LILRB1Q8NHL6 650 aaPredicted RBP4.47□□□□□ -1.69
SPG11-220ENST00000559933 SLC25A40Q8TBP6 338 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 NPRL2Q8WTW4 380 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 TSEN15Q8WW01 171 aaKnown RBP4.47□□□□□ -1.69
SPG11-220ENST00000559933 SGK3Q96BR1 496 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 ISOC1Q96CN7 298 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 MUCL1Q96DR8 90 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 ADAT3Q96EY9 351 aaPredicted RBP4.47□□□□□ -1.69
SPG11-220ENST00000559933 MRPL48Q96GC5 212 aaKnown RBP4.47□□□□□ -1.69
SPG11-220ENST00000559933 BOD1Q96IK1 185 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 GFI1Q99684 422 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 SYT3Q9BQG1 590 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 OR2J1Q9GZK6 312 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 FGF23Q9GZV9 251 aaPredicted RBP4.47□□□□□ -1.69
SPG11-220ENST00000559933 RBM38Q9H0Z9 239 aaKnown RBP4.47□□□□□ -1.69
SPG11-220ENST00000559933 VCX3AQ9NNX9 186 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 NOX4Q9NPH5 578 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 OBP2BQ9NPH6 170 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 TAS2R4Q9NYW5 299 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 ATP23Q9Y6H3 246 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 CEPT1Q9Y6K0 416 aa4.47□□□□□ -1.69
SPG11-220ENST00000559933 A0A0B4J203 849 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 TRBV5-5A0A0J9YX44 114 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 WIPF3A6NGB9 483 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 TMEM212A6NML5 194 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 H0YL77 283 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 H3BMQ9 156 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 SYT7O43581 403 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 PLPP2O43688 288 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 AIREO43918 545 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 SC5DO75845 299 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 GABARAPO95166 117 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 IGLV3-1P01715 115 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 OCM2P0CE71 109 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 COX5BP10606 129 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 SELEP16581 610 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 IGFBP2P18065 325 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 AGAP20933 346 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 CALRP27797 417 aaKnown RBP4.46□□□□□ -1.7
SPG11-220ENST00000559933 GABRA5P31644 462 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 THBS4P35443 961 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 KIR2DL3P43628 341 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 OR10A3P58181 314 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 TAS2R43P59537 309 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 FAM3AP98173 230 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 SORDQ00796 357 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 MXD1Q05195 221 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 ECH1Q13011 328 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 CTF1Q16619 201 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 ACSM3Q53FZ2 586 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 SPRNQ5BIV9 151 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 CEP78Q5JTW2 689 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 NCMAPQ5T1S8 102 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 OR2T2Q6IF00 324 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 XKRXQ6PP77 449 aa4.46□□□□□ -1.7
SPG11-220ENST00000559933 SLC22A25Q6T423 547 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms