RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, human

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHRNB4-204	ENST00000559849	KCTD20	Q7Z5Y7	419 aa		11.53	□□□□□ -0.56
CHRNB4-204	ENST00000559849	MOGAT3	Q86VF5	341 aa		11.53	□□□□□ -0.56
CHRNB4-204	ENST00000559849	DHRSX	Q8N5I4	330 aa		11.53	□□□□□ -0.56
CHRNB4-204	ENST00000559849	ZNF420	Q8TAQ5	688 aa	Predicted RBP	11.53	□□□□□ -0.56
CHRNB4-204	ENST00000559849	CYGB	Q8WWM9	190 aa		11.53	□□□□□ -0.56
CHRNB4-204	ENST00000559849	LYZL4	Q96KX0	146 aa		11.53	□□□□□ -0.56
CHRNB4-204	ENST00000559849	SOX7	Q9BT81	388 aa		11.53	□□□□□ -0.56
CHRNB4-204	ENST00000559849	OCEL1	Q9H607	264 aa		11.53	□□□□□ -0.56
CHRNB4-204	ENST00000559849	DCAF16	Q9NXF7	216 aa		11.53	□□□□□ -0.56
CHRNB4-204	ENST00000559849	GTF2A1L	Q9UNN4	478 aa		11.53	□□□□□ -0.56
CHRNB4-204	ENST00000559849	EXOG	Q9Y2C4	368 aa	Known RBP	11.53	□□□□□ -0.56
CHRNB4-204	ENST00000559849	SNX5	Q9Y5X3	404 aa		11.53	□□□□□ -0.56
CHRNB4-204	ENST00000559849	LOC100289279	A0A1B0GTE1	492 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	SMIM31	A0A1B0GVY4	71 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	TMEM178B	H3BS89	294 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PTBP3	O95758	552 aa	Known RBP	11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	TGFA	P01135	160 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ATP6V1B1	P15313	513 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	GNAL	P38405	381 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MAP2K3	P46734	347 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	C1orf87	Q8N0U7	546 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ACBD7	Q8N6N7	88 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	LINC01356	Q8N9X3	169 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	OR8S1	Q8NH09	359 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	OR51E1	Q8TCB6	317 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	TFAP2C	Q92754	450 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PPP1R14A	Q96A00	147 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	C1orf159	Q96HA4	380 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ADI1	Q9BV57	179 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	AMBN	Q9NP70	447 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	G6PC2	Q9NQR9	355 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	C14orf119	Q9NWQ9	140 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	OR52A1	Q9UKL2	312 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PAIP2B	Q9ULR5	123 aa	Known RBP	11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RHBDD3	Q9Y3P4	386 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RPL36	Q9Y3U8	105 aa	Known RBP	11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	WNK2	Q9Y3S1	2297 aa		11.52	□□□□□ -0.57
CHRNB4-204	ENST00000559849	DAPL1	A0PJW8	107 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ISPD	A4D126	451 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	INAFM1	C9JVW0	142 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RPP14	O95059	124 aa	Known RBP	11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FADS2	O95864	444 aa	Known RBP	11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	IGLV3-1	P01715	115 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	TTR	P02766	147 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	DBT	P11182	482 aa	Known RBP	11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ACKR3	P25106	362 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	IL5RA	Q01344	420 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF85	Q03923	595 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF91	Q05481	1191 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MFGE8	Q08431	387 aa	Predicted RBP	11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CNPY1	Q3B7I2	92 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	BCL2L15	Q5TBC7	163 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF691	Q5VV52	312 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	COMMD2	Q86X83	199 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ELMOD2	Q8IZ81	293 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	LGALS12	Q96DT0	336 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	GAL3ST1	Q99999	423 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PAPOLG	Q9BWT3	736 aa	Known RBP	11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	GPR84	Q9NQS5	396 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	UBAP1	Q9NZ09	502 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MPC1	Q9Y5U8	109 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ANXA2P2	A6NMY6	339 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849		B4DSR2	109 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MTRF1	O75570	445 aa	Known RBP	11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CST4	P01036	141 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	IRF2	P14316	349 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF16	P17020	682 aa	Predicted RBP	11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CDH15	P55291	814 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RIPPLY3	P57055	190 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	BTG1	P62324	171 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ADARB1	P78563	741 aa	Known RBP	11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RAB40B	Q12829	278 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MPPED2	Q15777	294 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	KLHL22	Q53GT1	634 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PRAMEF6	Q5VXH4	476 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FAM166A	Q6J272	317 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FAM220A	Q7Z4H9	259 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	LRRC28	Q86X40	367 aa	Predicted RBP	11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	SETD9	Q8NE22	299 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	OR11L1	Q8NGX0	322 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849		Q8TCH9	128 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	APH1B	Q8WW43	257 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	DVL3	Q92997	716 aa	Predicted RBP	11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RAB39B	Q96DA2	213 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ANKRD60	Q9BZ19	345 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	ZNF665	Q9H7R5	613 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	FN3KRP	Q9HA64	309 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	UFSP2	Q9NUQ7	469 aa		11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	MRPS18A	Q9NVS2	196 aa	Known RBP	11.51	□□□□□ -0.57
CHRNB4-204	ENST00000559849	LMX1B	O60663	402 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	CLIC3	O95833	236 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	IGHV2-70	P01814	119 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	RBMX	P38159	391 aa	Known RBP	11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	PMEL	P40967	661 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	HNRNPA0	Q13151	305 aa	Known RBP	11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	IL18R1	Q13478	541 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	TMEM155	Q4W5P6	130 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	KRT74	Q7RTS7	529 aa		11.5	□□□□□ -0.57
CHRNB4-204	ENST00000559849	SEMA6D	Q8NFY4	1073 aa		11.5	□□□□□ -0.57

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