RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 SNCBQ16143 134 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 LYPD2Q6UXB3 125 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 ZNF826PQ6ZT77 177 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 NLRC3Q7RTR2 1065 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 GID4Q8IVV7 300 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 ZNF679Q8IYX0 411 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 FTMTQ8N4E7 242 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 GCSAMQ8N6F7 178 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 OR8B3Q8NGG8 313 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 ASB17Q8WXJ9 295 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 OR8B4Q96RC9 309 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 OR8B2Q96RD0 313 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 IL4I1Q96RQ9 567 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 PKP2Q99959 881 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 RBM4BQ9BQ04 359 aaKnown RBP9.14□□□□□ -0.95
SPG11-216ENST00000559347 C19orf24Q9BVV8 132 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 OSBPL10Q9BXB5 764 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 MROQ9BYG7 248 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 RIBC2Q9H4K1 309 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 C7orf69Q9H7B7 122 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 CTSZQ9UBR2 303 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 RHBDD3Q9Y3P4 386 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 TMEM14AQ9Y6G1 99 aa9.14□□□□□ -0.95
SPG11-216ENST00000559347 IGHV2-70DA0A0C4DH43 119 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 A0A0U1RQV5 110 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 TMEM269A0A1B0GVZ9 245 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 hCG_1807616A0A1W2PRN6 198 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 OOEPA6NGQ2 149 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 LGALS8O00214 317 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 EI24O14681 340 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 PHYHO14832 338 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 ZNF254O75437 659 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 SRSF10O75494 262 aaKnown RBP9.13□□□□□ -0.95
SPG11-216ENST00000559347 IGLV3-1P01715 115 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 GRPP07492 148 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 EGR1P18146 543 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 DCTDP32321 178 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 GNALP38405 381 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 CXCR4P61073 352 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 CSNK2BP67870 215 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 PRDX4Q13162 271 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 ZNF829Q3KNS6 432 aaPredicted RBP9.13□□□□□ -0.95
SPG11-216ENST00000559347 ARMCX4Q5H9R4 360 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 LIPNQ5VXI9 398 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 SFRP4Q6FHJ7 346 aaPredicted RBP9.13□□□□□ -0.95
SPG11-216ENST00000559347 ZNF841Q6ZN19 808 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 C11orf53Q8IXP5 236 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 SLC35F2Q8IXU6 374 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 OR1M1Q8NGA1 313 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 NANPQ8TBE9 248 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 HPSE2Q8WWQ2 592 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 MNTQ99583 582 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 FGF23Q9GZV9 251 aaPredicted RBP9.13□□□□□ -0.95
SPG11-216ENST00000559347 TLNRD1Q9H1K6 362 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 TRIM36Q9NQ86 728 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 CLN6Q9NWW5 311 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 HAO2Q9NYQ3 351 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 CLN8Q9UBY8 286 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 NUFIP1Q9UHK0 495 aaKnown RBP9.13□□□□□ -0.95
SPG11-216ENST00000559347 IKZF2Q9UKS7 526 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 MPC1Q9Y5U8 109 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 FBN3Q75N90 2809 aa9.13□□□□□ -0.95
SPG11-216ENST00000559347 A0A0A6YYJ9 748 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 ACOD1A6NK06 481 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 ANXA2P2A6NMY6 339 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 ZNF850A8MQ14 1090 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 RGS9O75916 674 aaPredicted RBP9.12□□□□□ -0.95
SPG11-216ENST00000559347 VENTXO95231 258 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 CST4P01036 141 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 LHBP01229 141 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 ALPLP05186 524 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 RIDAP52758 137 aaKnown RBP9.12□□□□□ -0.95
SPG11-216ENST00000559347 HILS1P60008 231 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 IL5RAQ01344 420 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 KCNJ8Q15842 424 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 KLF17Q5JT82 389 aaPredicted RBP9.12□□□□□ -0.95
SPG11-216ENST00000559347 TEX36Q5VZQ5 186 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 WDR25Q64LD2 544 aaPredicted RBP9.12□□□□□ -0.95
SPG11-216ENST00000559347 ZFP1Q6P2D0 407 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 ZNF322Q6U7Q0 402 aaPredicted RBP9.12□□□□□ -0.95
SPG11-216ENST00000559347 WDR82Q6UXN9 313 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 SSX6Q7RTT6 188 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 FAM90A1Q86YD7 464 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 BOLLQ8N9W6 283 aaKnown RBP9.12□□□□□ -0.95
SPG11-216ENST00000559347 OR51G2Q8NGK0 314 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 OR8J1Q8NGP2 316 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 ZNF418Q8TF45 676 aaPredicted RBP9.12□□□□□ -0.95
SPG11-216ENST00000559347 SLC6A7Q99884 636 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 MRI1Q9BV20 369 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 RTL8AQ9BWD3 113 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 PBOV1Q9GZY1 135 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 MOB1AQ9H8S9 216 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 RNPEPL1Q9HAU8 725 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 ABCB9Q9NP78 766 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 USE1Q9NZ43 259 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 H2AFY2Q9P0M6 372 aaPredicted RBP9.12□□□□□ -0.95
SPG11-216ENST00000559347 WARS2Q9UGM6 360 aaKnown RBP9.12□□□□□ -0.95
SPG11-216ENST00000559347 AUP1Q9Y679 476 aa9.12□□□□□ -0.95
SPG11-216ENST00000559347 TRAV38-1A0A0B4J264 116 aa9.11□□□□□ -0.95
SPG11-216ENST00000559347 ZNF816-ZNF321PA0A0X1KG74 233 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms