RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 MYL12AP19105 171 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 TGM4P49221 684 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 CCR9P51686 369 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 RPS11P62280 158 aaKnown RBP eCLIP9.21□□□□□ -0.94
TPM1-217ENST00000559108 TNFAIP6P98066 277 aaPredicted RBP9.21□□□□□ -0.94
TPM1-217ENST00000559108 PRDX4Q13162 271 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 RNLSQ5VYX0 342 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 TMEM42Q69YG0 159 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 DMKNQ6E0U4 476 aaPredicted RBP9.21□□□□□ -0.94
TPM1-217ENST00000559108 CRIP3Q6Q6R5 217 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 C11orf53Q8IXP5 236 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 ZNF420Q8TAQ5 688 aaPredicted RBP9.21□□□□□ -0.94
TPM1-217ENST00000559108 C10orf105Q8TEF2 133 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 MEGF10Q96KG7 1140 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 Q96MF0 132 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 ADAT1Q9BUB4 502 aaKnown RBP9.21□□□□□ -0.94
TPM1-217ENST00000559108 RAB1BQ9H0U4 201 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 BABAM2Q9NXR7 383 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 NKIRAS2Q9NYR9 191 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 MRPL15Q9P015 296 aaKnown RBP9.21□□□□□ -0.94
TPM1-217ENST00000559108 CGGBP1Q9UFW8 167 aaPredicted RBP9.21□□□□□ -0.94
TPM1-217ENST00000559108 PIGLQ9Y2B2 252 aa9.21□□□□□ -0.94
TPM1-217ENST00000559108 IGKV1-9A0A0C4DH69 117 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 PNMA8CA0A1B0GUJ8 204 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 LOC390937A0A1W2PQ73 354 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 PTBP3O95758 552 aaKnown RBP9.2□□□□□ -0.94
TPM1-217ENST00000559108 CST4P01036 141 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 ISG15P05161 165 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 TACSTD2P09758 323 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 CD200P41217 278 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 WNT4P56705 351 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 SELENOVP59797 346 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 CSNK2BP67870 215 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 INSL4Q14641 139 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 UBE2V2Q15819 145 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 CLEC12BQ2HXU8 276 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 CEP78Q5JTW2 689 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 FAM209AQ5JX71 171 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 RBM48Q5RL73 367 aaKnown RBP9.2□□□□□ -0.94
TPM1-217ENST00000559108 FAM201AQ5SY85 155 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 ZNF826PQ6ZT77 177 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 DOK3Q7L591 496 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 PRSS48Q7RTY5 328 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 COMMD2Q86X83 199 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 MAPK1IP1LQ8NDC0 245 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 OR13G1Q8NGZ3 307 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 NEU4Q8WWR8 484 aaPredicted RBP9.2□□□□□ -0.94
TPM1-217ENST00000559108 OR5P3Q8WZ94 311 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 MYDGFQ969H8 173 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 TRMT61AQ96FX7 289 aaKnown RBP9.2□□□□□ -0.94
TPM1-217ENST00000559108 PAPOLGQ9BWT3 736 aaKnown RBP9.2□□□□□ -0.94
TPM1-217ENST00000559108 OPA3Q9H6K4 179 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 SP140LQ9H930 580 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 GPR173Q9NS66 373 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 CYSLTR2Q9NS75 346 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 ZNF275Q9NSD4 429 aaPredicted RBP9.2□□□□□ -0.94
TPM1-217ENST00000559108 TMEM100Q9NV29 134 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 SCN3BQ9NY72 215 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 ZDHHC8Q9ULC8 765 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 TPRKBQ9Y3C4 175 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 ACANP16112 2415 aa9.2□□□□□ -0.94
TPM1-217ENST00000559108 HIVEP1P15822 2718 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 IGKV1-27A0A075B6S5 117 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 TRBV2A0A0J9YWF9 115 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 ZNF816-ZNF321PA0A0X1KG74 233 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 A0A1B0GVI7 797 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 ANKRD61A6NGH8 418 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 MYL12BO14950 172 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 SYT7O43581 403 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 UBCP0CG48 685 aaKnown RBP9.19□□□□□ -0.94
TPM1-217ENST00000559108 EGR1P18146 543 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 PCMT1P22061 227 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 ACHEP22303 614 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 CFL1P23528 166 aaKnown RBP9.19□□□□□ -0.94
TPM1-217ENST00000559108 CRYBB2P43320 205 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 GBX2P52951 348 aaPredicted RBP9.19□□□□□ -0.94
TPM1-217ENST00000559108 GABARAPL2P60520 117 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 SLC3A1Q07837 685 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 MED21Q13503 144 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 RIN1Q13671 783 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 OR8G1Q15617 311 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 PCGF3Q3KNV8 242 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 TMPRSS11AQ6ZMR5 421 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 MOGAT3Q86VF5 341 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 SPARTQ8N0X7 666 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 C19orf18Q8NEA5 215 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 SEMA6DQ8NFY4 1073 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 PIGCQ92535 297 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 SMIM19Q96E16 107 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 OPALINQ96PE5 141 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 NKX3-1Q99801 234 aaPredicted RBP9.19□□□□□ -0.94
TPM1-217ENST00000559108 Q9H521 79 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 METTL17Q9H7H0 456 aaPredicted RBP9.19□□□□□ -0.94
TPM1-217ENST00000559108 SAP30LQ9HAJ7 183 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 GCM1Q9NP62 436 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 UFSP2Q9NUQ7 469 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 IL19Q9UHD0 177 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 ZNF391Q9UJN7 358 aa9.19□□□□□ -0.94
TPM1-217ENST00000559108 ZANQ9Y493 2812 aa9.18□□□□□ -0.94
TPM1-217ENST00000559108 IGHV4-61A0A0C4DH41 118 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms