RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 RDH12Q96NR8 316 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 OR2A5Q96R48 311 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 CAMK2N2Q96S95 79 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 VAT1Q99536 393 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 SULT4A1Q9BR01 284 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 ACBD6Q9BR61 282 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 TMEM243Q9BU79 118 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 COA1Q9GZY4 146 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 SLC38A1Q9H2H9 487 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 C1orf198Q9H425 327 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 HMG20AQ9NP66 347 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 ACOT13Q9NPJ3 140 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 OR2S2Q9NQN1 319 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF331Q9NQX6 463 aaPredicted RBP1.58□□□□□ -2.16
GABPB1-209ENST00000559100 DDX19AQ9NUU7 478 aaKnown RBP1.58□□□□□ -2.16
GABPB1-209ENST00000559100 STX18Q9P2W9 335 aaKnown RBP1.58□□□□□ -2.16
GABPB1-209ENST00000559100 CLEC2DQ9UHP7 191 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 MRM2Q9UI43 246 aaKnown RBP1.58□□□□□ -2.16
GABPB1-209ENST00000559100 ENPP5Q9UJA9 477 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF222Q9UK12 451 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 NXT1Q9UKK6 140 aaKnown RBP1.58□□□□□ -2.16
GABPB1-209ENST00000559100 POFUT2Q9Y2G5 429 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 AP3M1Q9Y2T2 418 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 WIF1Q9Y5W5 379 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 KIF25-AS1Q9Y6Z4 181 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 MN1Q10571 1320 aaPredicted RBP1.58□□□□□ -2.16
GABPB1-209ENST00000559100 MAP3K19Q56UN5 1328 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 DENND4AQ7Z401 1863 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 AK9Q5TCS8 1911 aa1.58□□□□□ -2.16
GABPB1-209ENST00000559100 H0Y9J4 135 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 M0R1X1 148 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 MANBAO00462 879 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 RAD51BO15315 384 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 CHST10O43529 356 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF861PO60384 105 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 SERPINB7O75635 380 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 ZMPSTE24O75844 475 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 FADS2O95864 444 aaKnown RBP1.57□□□□□ -2.16
GABPB1-209ENST00000559100 CTSLP07711 333 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 OR56A5P0C7T3 313 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF806P0C7X5 589 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 GNRHRP30968 328 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 CD70P32970 193 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 KCNJ3P48549 501 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 MNAT1P51948 309 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 MAP3K7CLP57077 242 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 OR12D2P58182 307 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 CRADDP78560 199 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 C2orf83Q53S99 150 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 MPV17L2Q567V2 206 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 TMEM255AQ5JRV8 349 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 ACTL10Q5JWF8 245 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 AVPI1Q5T686 147 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 HHATQ5VTY9 493 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF470Q6ECI4 717 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF530Q6P9A1 599 aaPredicted RBP1.57□□□□□ -2.16
GABPB1-209ENST00000559100 OPN5Q6U736 354 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 EPGNQ6UW88 154 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 LRRC6Q86X45 466 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 CRLF3Q8IUI8 442 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 WDFY1Q8IWB7 410 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 RIMKLAQ8IXN7 391 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 MKXQ8IYA7 352 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 FAM9CQ8IZT9 166 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 SLC7A5P1Q8MH63 180 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 PGAM4Q8N0Y7 254 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 DAW1Q8N136 415 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 LGI3Q8N145 548 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 C17orf78Q8N4C9 275 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 Q8N976 141 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 CDRT4Q8N9R6 151 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 C19orf18Q8NEA5 215 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 MNS1Q8NEH6 495 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 ATP6V1C2Q8NEY4 427 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 OR5W2Q8NH69 310 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 SYNPRQ8TBG9 265 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 NT5CQ8TCD5 201 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 DCAKDQ8WVC6 231 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 GTF2H4Q92759 462 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 LRRC45Q96CN5 670 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 RBMXL1Q96E39 390 aaKnown RBP1.57□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF799Q96GE5 643 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF75AQ96N20 296 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 ZNF396Q96N95 335 aaPredicted RBP1.57□□□□□ -2.16
GABPB1-209ENST00000559100 OR2M4Q96R27 311 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 CDX2Q99626 313 aaPredicted RBP1.57□□□□□ -2.16
GABPB1-209ENST00000559100 PDCD1LG2Q9BQ51 273 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 CHAC1Q9BUX1 264 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 EMC6Q9BV81 110 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 TOLLIPQ9H0E2 274 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 OR51B5Q9H339 312 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 WDR55Q9H6Y2 383 aaPredicted RBP1.57□□□□□ -2.16
GABPB1-209ENST00000559100 PLEKHA1Q9HB21 404 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 SLC38A10Q9HBR0 1119 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 WFDC1Q9HC57 220 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 IFT46Q9NQC8 304 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 TREX1Q9NSU2 369 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 NRBP2Q9NSY0 501 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 NECAP2Q9NVZ3 263 aa1.57□□□□□ -2.16
GABPB1-209ENST00000559100 RMND1Q9NWS8 449 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms