RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 CST4P01036 141 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 HTR1AP08908 422 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 TACSTD2P09758 323 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 CD99P14209 185 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 FAHP16930 419 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 ZNF19P17023 458 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 C21orf33P30042 268 aaPredicted RBP9.64□□□□□ -0.87
SNX1-204ENST00000559061 THBS2P35442 1172 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 VHLP40337 213 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 GATA4P43694 442 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 GTF2A1P52655 376 aaPredicted RBP9.64□□□□□ -0.87
SNX1-204ENST00000559061 DSCR9P59020 149 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 CARTPTQ16568 116 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 ODF4Q2M2E3 257 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 ZMAT1Q5H9K5 638 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 C6orf141Q5SZD1 244 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 BCL2L15Q5TBC7 163 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 TMEM42Q69YG0 159 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 SYS1Q8N2H4 156 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 SPRYD4Q8WW59 207 aaPredicted RBP9.64□□□□□ -0.87
SNX1-204ENST00000559061 FAM71F1Q96KD3 344 aaPredicted RBP9.64□□□□□ -0.87
SNX1-204ENST00000559061 DIRC2Q96SL1 478 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 INPP5EQ9NRR6 644 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 PCDHGB1Q9Y5G3 927 aa9.64□□□□□ -0.87
SNX1-204ENST00000559061 LOC107986453A0A1B0GWG9 222 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 A6NIN4 97 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 NDUFS8O00217 210 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 DHRS3O75911 302 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 IGHV2-70P01814 119 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 MT-ND5P03915 603 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 SLC25A16P16260 332 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 DCKP27707 260 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 SLC35A2P78381 396 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 LOXL1Q08397 574 aaPredicted RBP9.63□□□□□ -0.87
SNX1-204ENST00000559061 ST3GAL4Q11206 333 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 PRDX4Q13162 271 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 KLHL22Q53GT1 634 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 FAM201AQ5SY85 155 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 AVPI1Q5T686 147 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 ASPHD2Q6ICH7 369 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 AHSA2Q719I0 299 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 MOGAT3Q86VF5 341 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 BPIFB6Q8NFQ5 453 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 OR51A4Q8NGJ6 313 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 C18orf12Q96KH6 178 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 PIMREGQ9BSJ6 248 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 SP140LQ9H930 580 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 DECR2Q9NUI1 292 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 TMEM106BQ9NUM4 274 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 CNOT2Q9NZN8 540 aaKnown RBP9.63□□□□□ -0.87
SNX1-204ENST00000559061 GTF2A1LQ9UNN4 478 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 WIPI2Q9Y4P8 454 aa9.63□□□□□ -0.87
SNX1-204ENST00000559061 ZNF850A8MQ14 1090 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 GMDSO60547 372 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 ZFPL1O95159 310 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 CYB5R3P00387 301 aaPredicted RBP9.62□□□□□ -0.87
SNX1-204ENST00000559061 ERCC1P07992 297 aaPredicted RBP9.62□□□□□ -0.87
SNX1-204ENST00000559061 INHBBP09529 407 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 EGR1P18146 543 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 CFL1P23528 166 aaKnown RBP9.62□□□□□ -0.87
SNX1-204ENST00000559061 DDOSTP39656 456 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 ACTA2P62736 377 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 ACTG2P63267 376 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 CSNK2BP67870 215 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 ZNF154Q13106 437 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 IRF3Q14653 427 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 OR8G1Q15617 311 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 CRIP3Q6Q6R5 217 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 ZNF826PQ6ZT77 177 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 KCTD20Q7Z5Y7 419 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 CELF2-AS1Q8N7Q2 184 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 CSNK2A3Q8NEV1 391 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 CLDND2Q8NHS1 167 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 Q8TCH9 128 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 OR5P3Q8WZ94 311 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 CCL17Q92583 94 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 ADAT3Q96EY9 351 aaPredicted RBP9.62□□□□□ -0.87
SNX1-204ENST00000559061 TMEM80Q96HE8 168 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 PAPOLGQ9BWT3 736 aaKnown RBP9.62□□□□□ -0.87
SNX1-204ENST00000559061 TLNRD1Q9H1K6 362 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 ZNF391Q9UJN7 358 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 RAB26Q9ULW5 256 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 LSM2Q9Y333 95 aaKnown RBP9.62□□□□□ -0.87
SNX1-204ENST00000559061 MALRD1Q5VYJ5 2156 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 SVEP1Q4LDE5 3571 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 ABCA1O95477 2261 aa9.62□□□□□ -0.87
SNX1-204ENST00000559061 CSPG4Q6UVK1 2322 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 ZNF816-ZNF321PA0A0X1KG74 233 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 EFCAB10A6NFE3 127 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 ANKRD30BLA7E2S9 258 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 TMEM178BH3BS89 294 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.61□□□□□ -0.87
SNX1-204ENST00000559061 TPD52L2O43399 206 aaKnown RBP9.61□□□□□ -0.87
SNX1-204ENST00000559061 FCN3O75636 299 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 LY6G6DO95868 133 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 ISG15P05161 165 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 CDK1P06493 297 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 IGHV4-31P0DP07 118 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 FOSL1P15407 271 aa9.61□□□□□ -0.87
SNX1-204ENST00000559061 USF1P22415 310 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms