RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 MEPCEQ7L2J0 689 aaKnown RBP10.06□□□□□ -0.8
TPM1-216ENST00000558910 PHC2Q8IXK0 858 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 SLC35F2Q8IXU6 374 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 C1orf87Q8N0U7 546 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 PARP8Q8N3A8 854 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 OR8B12Q8NGG6 310 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 FAM81AQ8TBF8 368 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 TMEM163Q8TC26 289 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 DNAJC9Q8WXX5 260 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 CENPNQ96H22 339 aaPredicted RBP10.06□□□□□ -0.8
TPM1-216ENST00000558910 CNN2Q99439 309 aaKnown RBP10.06□□□□□ -0.8
TPM1-216ENST00000558910 PRRG3Q9BZD7 231 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 SP140LQ9H930 580 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 G6PC2Q9NQR9 355 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 RNF7Q9UBF6 113 aa10.06□□□□□ -0.8
TPM1-216ENST00000558910 hCG_38984A0A1B0GV85 526 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 TMEM269A0A1B0GVZ9 245 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 A6NIN4 97 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 ZAR1LA6NP61 321 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 TRAPPC2LH3BP13 241 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 FOXH1O75593 365 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 BAG2O95816 211 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 APOC1P02654 83 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 GYPAP02724 150 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 ALOX5APP20292 161 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 ATP6V1E1P36543 226 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 CD200P41217 278 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 CXCR4P61073 352 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 GNB2P62879 340 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 MFGE8Q08431 387 aaPredicted RBP10.05□□□□□ -0.8
TPM1-216ENST00000558910 KRTAP24-1Q3LI83 254 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 CEP78Q5JTW2 689 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 C12orf73Q69YU5 71 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 KLBQ86Z14 1044 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 MUC20Q8N307 709 aaPredicted RBP10.05□□□□□ -0.8
TPM1-216ENST00000558910 TMEM158Q8WZ71 300 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 UBE2FQ969M7 185 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 SEH1LQ96EE3 360 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 LYZL4Q96KX0 146 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 TECTBQ96PL2 329 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 GABARAPL1Q9H0R8 117 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 MRPL15Q9P015 296 aaKnown RBP10.05□□□□□ -0.8
TPM1-216ENST00000558910 AASSQ9UDR5 926 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 OR5V1Q9UGF6 321 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 TANC2Q9HCD6 1990 aa10.05□□□□□ -0.8
TPM1-216ENST00000558910 ZNF670-ZNF695F2Z2N8 137 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 EI24O14681 340 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 EREGO14944 169 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 TCF21O43680 179 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 GMDSO60547 372 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 TFF1P04155 84 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 WNT2P09544 360 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 EGR1P18146 543 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 ACKR3P25106 362 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 RIDAP52758 137 aaKnown RBP10.04□□□□□ -0.8
TPM1-216ENST00000558910 ACTR3P61158 418 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 PRDX4Q13162 271 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 TMEM155Q4W5P6 130 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 KCTD18Q6PI47 426 aaPredicted RBP10.04□□□□□ -0.8
TPM1-216ENST00000558910 ZNF322Q6U7Q0 402 aaPredicted RBP10.04□□□□□ -0.8
TPM1-216ENST00000558910 PRSS45Q7RTY3 260 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 WDR86Q86TI4 376 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 BATF2Q8N1L9 274 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 OR10H4Q8NGA5 316 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 OR8B3Q8NGG8 313 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 OR52H1Q8NGJ2 320 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 OR51E1Q8TCB6 317 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 LRRC29Q8WV35 223 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 RPL3LQ92901 407 aaKnown RBP10.04□□□□□ -0.8
TPM1-216ENST00000558910 NEIL1Q96FI4 390 aaPredicted RBP10.04□□□□□ -0.8
TPM1-216ENST00000558910 DUS3LQ96G46 650 aaKnown RBP10.04□□□□□ -0.8
TPM1-216ENST00000558910 OR8B2Q96RD0 313 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 SLC6A7Q99884 636 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 SSBP3Q9BWW4 388 aaPredicted RBP10.04□□□□□ -0.8
TPM1-216ENST00000558910 MROQ9BYG7 248 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 YIPF3Q9GZM5 350 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 PBOV1Q9GZY1 135 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 SLC22A4Q9H015 551 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 NIPAL2Q9H841 368 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 SNTG1Q9NSN8 517 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 ORC6Q9Y5N6 252 aa10.04□□□□□ -0.8
TPM1-216ENST00000558910 H3BNX3 289 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 IFNL4K9M1U5 179 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 CDIPTO14735 213 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 ADAM20O43506 726 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 PITPNBP48739 271 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 ZNF404Q494X3 552 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 ARMCX4Q5H9R4 360 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 AADACL4Q5VUY2 407 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 MOB3CQ70IA8 216 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 SSX6Q7RTT6 188 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 THAP5Q7Z6K1 395 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 FGFRL1Q8N441 504 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 CBR4Q8N4T8 237 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 YIPF7Q8N8F6 280 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 OR1M1Q8NGA1 313 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 OR5T2Q8NGG2 359 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 SPSB4Q96A44 273 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 RNF170Q96K19 258 aa10.03□□□□□ -0.8
TPM1-216ENST00000558910 DUX5Q96PT3 197 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms