RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 GMFBP60983 142 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 GRB2P62993 217 aaKnown RBP11.17□□□□□ -0.62
VPS18-203ENST00000558855 IL13RA1P78552 427 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 TIGD6Q17RP2 521 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 GPR157Q5UAW9 335 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 TMEM236Q5W0B7 351 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 PLBD1Q6P4A8 553 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 KIR3DL3Q8N743 410 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 PLPP7Q8NBV4 271 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 OR5T2Q8NGG2 359 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 GIPC3Q8TF64 312 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 CANT1Q8WVQ1 401 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 ST8SIA4Q92187 359 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 ITPKCQ96DU7 683 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 CHID1Q9BWS9 393 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 OR51V1Q9H2C8 321 aa11.17□□□□□ -0.62
VPS18-203ENST00000558855 PDP1Q9P0J1 537 aaPredicted RBP11.17□□□□□ -0.62
VPS18-203ENST00000558855 RPUSD1Q9UJJ7 312 aaKnown RBP11.17□□□□□ -0.62
VPS18-203ENST00000558855 TRAV38-1A0A0B4J264 116 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 IGHV1-69DA0A0B4J2H0 117 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 H3BN98 237 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 P2RY10O00398 339 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 CST1P01037 141 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 IGHV1-69P01742 117 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 IGHV4-59P01825 116 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 ZNF3P17036 446 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 SLC2A5P22732 501 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 HSD11B1P28845 292 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 NPY4RP50391 375 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 KLRD1Q13241 179 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 GINS1Q14691 196 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 FAM98BQ52LJ0 330 aaKnown RBP11.16□□□□□ -0.62
VPS18-203ENST00000558855 STUMQ69YW2 141 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 PNKDQ8N490 385 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 Q8N7P7 452 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 OR8B12Q8NGG6 310 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 OR8S1Q8NH09 359 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 TEX47Q8TBZ9 253 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 WFDC12Q8WWY7 111 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 RPL3LQ92901 407 aaKnown RBP11.16□□□□□ -0.62
VPS18-203ENST00000558855 ASB9Q96DX5 294 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 PAPOLGQ9BWT3 736 aaKnown RBP11.16□□□□□ -0.62
VPS18-203ENST00000558855 TTTY10Q9BZA0 68 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 TLNRD1Q9H1K6 362 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 MUC13Q9H3R2 512 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 SNTG1Q9NSN8 517 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 KAAG1Q9UBP8 84 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 DNAJB11Q9UBS4 358 aa11.16□□□□□ -0.62
VPS18-203ENST00000558855 CCDC182A6NF36 153 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 ANKRD30BLA7E2S9 258 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 M0R129 80 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 CDIPTO14735 213 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 IFNGP01579 166 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 RAP2AP10114 183 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 POU1F1P28069 291 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 DCTDP32321 178 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 CDK5Q00535 292 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 PRDX4Q13162 271 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 RHOUQ7L0Q8 258 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 VMO1Q7Z5L0 202 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 CPOQ8IVL8 374 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 SPERTQ8NA61 448 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 LY6G5BQ8NDX9 201 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 OTOSQ8NHW6 89 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 ZDHHC16Q969W1 377 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 PGAM5Q96HS1 289 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 TOR3AQ9H497 397 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 OPA3Q9H6K4 179 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 ELL3Q9HB65 397 aaPredicted RBP11.15□□□□□ -0.62
VPS18-203ENST00000558855 SIRT7Q9NRC8 400 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 C14orf119Q9NWQ9 140 aa11.15□□□□□ -0.62
VPS18-203ENST00000558855 NOP16Q9Y3C1 178 aaKnown RBP11.15□□□□□ -0.62
VPS18-203ENST00000558855 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.14□□□□□ -0.63
VPS18-203ENST00000558855 A0A1W2PRD5 423 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 A0A1W2PRF3 423 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 A0A1W2PRM7 423 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 ARRDC5A6NEK1 342 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 ZNF850A8MQ14 1090 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 RNASEK-C17orf49H0YIS7 233 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 PSMD9O00233 223 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 RHBDL1O75783 438 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 H2BFMP0C1H6 154 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 CALB2P22676 271 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 DDOSTP39656 456 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 RAG2P55895 527 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 IKZF1Q13422 519 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 TREML4Q6UXN2 200 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 ARHGAP24Q8N264 748 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 PPP1R14AQ96A00 147 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 GAFA1Q96PS6 74 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 THTPAQ9BU02 230 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 RNPEPL1Q9HAU8 725 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 ACOXLQ9NUZ1 547 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 PRPF19Q9UMS4 504 aaKnown RBP11.14□□□□□ -0.63
VPS18-203ENST00000558855 COPS3Q9UNS2 423 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 LRP12Q9Y561 859 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 MMP24Q9Y5R2 645 aa11.14□□□□□ -0.63
VPS18-203ENST00000558855 POM121CA8CG34 1229 aa11.13□□□□□ -0.63
VPS18-203ENST00000558855 PRR23D1E9PI22 279 aaPredicted RBP11.13□□□□□ -0.63
VPS18-203ENST00000558855 AKR7A2O43488 359 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms