RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 FAM90A1Q86YD7 464 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 PAPD5Q8NDF8 572 aaKnown RBP9.91□□□□□ -0.82
HERC1-202ENST00000558324 C1orf147Q96MC9 270 aaPredicted RBP9.91□□□□□ -0.82
HERC1-202ENST00000558324 PCGF1Q9BSM1 259 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 CADM1Q9BY67 442 aaKnown RBP9.91□□□□□ -0.82
HERC1-202ENST00000558324 SLC25A19Q9HC21 320 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 TRIM36Q9NQ86 728 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 LAMP5Q9UJQ1 280 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 LRP12Q9Y561 859 aa9.91□□□□□ -0.82
HERC1-202ENST00000558324 ANXA2P2A6NMY6 339 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 ZNF850A8MQ14 1090 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 TMPRSS2O15393 492 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 PLATP00750 562 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 PPIAL4GP0DN37 164 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 PRTN3P24158 256 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 ACKR3P25106 362 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 NPY4RP50391 375 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 DAPP51397 102 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 CRISP1P54107 249 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 PRDX4Q13162 271 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 AWAT1Q58HT5 328 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 SLC35D3Q5M8T2 416 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 RUSC1-AS1Q66K80 236 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 KCTD8Q6ZWB6 473 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 RHOUQ7L0Q8 258 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 KRT77Q7Z794 578 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 COMMD2Q86X83 199 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 C11orf53Q8IXP5 236 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 FGFRL1Q8N441 504 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 FTMTQ8N4E7 242 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 CSNK2A3Q8NEV1 391 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 OR1M1Q8NGA1 313 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 OR8B12Q8NGG6 310 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 ST8SIA4Q92187 359 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 SEH1LQ96EE3 360 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 LYZL4Q96KX0 146 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 MICU1Q9BPX6 476 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 RGCCQ9H4X1 137 aa9.9□□□□□ -0.82
HERC1-202ENST00000558324 A0A1B0GW55 424 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 CCDC182A6NF36 153 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 DVL1O14640 695 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 CDIPTO14735 213 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 PRKYO43930 277 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 MITFO75030 526 aaPredicted RBP9.89□□□□□ -0.83
HERC1-202ENST00000558324 DUX4L2P0CJ85 424 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 DUX4L3P0CJ86 424 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 DUX4L4P0CJ87 422 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 DUX4L5P0CJ88 424 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 DUX4L6P0CJ89 424 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 DUX4L7P0CJ90 424 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 CFHR2P36980 270 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 MTNR1AP48039 350 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 COMPP49747 757 aaPredicted RBP9.89□□□□□ -0.83
HERC1-202ENST00000558324 BNIP1Q12981 228 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 PTGES3Q15185 160 aaKnown RBP9.89□□□□□ -0.83
HERC1-202ENST00000558324 MICBQ29980 383 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 TUSC1Q2TAM9 212 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 WDR38Q5JTN6 314 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 GPR157Q5UAW9 335 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 LCN1P1Q5VSP4 162 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 CD276Q5ZPR3 534 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 FAHD1Q6P587 224 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 DUX4L9Q6RFH8 374 aaPredicted RBP9.89□□□□□ -0.83
HERC1-202ENST00000558324 WDR82Q6UXN9 313 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 BCDIN3DQ7Z5W3 292 aaKnown RBP9.89□□□□□ -0.83
HERC1-202ENST00000558324 OR5K1Q8NHB7 308 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 FAM81AQ8TBF8 368 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 DNAJC9Q8WXX5 260 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 PIGCQ92535 297 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 TAF15Q92804 592 aaKnown RBP eCLIP9.89□□□□□ -0.83
HERC1-202ENST00000558324 RPL3LQ92901 407 aaKnown RBP9.89□□□□□ -0.83
HERC1-202ENST00000558324 UTP4Q969X6 686 aaKnown RBP9.89□□□□□ -0.83
HERC1-202ENST00000558324 ITPKCQ96DU7 683 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 CCL13Q99616 98 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 PKP2Q99959 881 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 RTL8AQ9BWD3 113 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 TNFRSF19Q9NS68 423 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 KRT84Q9NSB2 600 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 DUX4Q9UBX2 424 aa9.89□□□□□ -0.83
HERC1-202ENST00000558324 PRR32B1ATL7 298 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 ZNF879B4DU55 563 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.88□□□□□ -0.83
HERC1-202ENST00000558324 TNFRSF13BO14836 293 aaPredicted RBP9.88□□□□□ -0.83
HERC1-202ENST00000558324 NDUFA2O43678 99 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 FCN3O75636 299 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 TOX4O94842 621 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 LHBP01229 141 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 ALOX5APP20292 161 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 IL5RAQ01344 420 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 SLC9A3R2Q15599 337 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 SNCBQ16143 134 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 DEFB112Q30KQ8 113 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 DMRTC1Q5HYR2 192 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 TEX36Q5VZQ5 186 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 BTN2A1Q7KYR7 527 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 GALNT4Q8N4A0 578 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 FAM216BQ8N7L0 139 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 PNLDC1Q8NA58 520 aaKnown RBP9.88□□□□□ -0.83
HERC1-202ENST00000558324 HPSE2Q8WWQ2 592 aa9.88□□□□□ -0.83
HERC1-202ENST00000558324 ZDHHC16Q969W1 377 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms