RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TBXA2RP21731 343 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 SP6Q3SY56 376 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 H1FNTQ75WM6 255 aaPredicted RBP12.62□□□□□ -0.39
SPG11-210ENST00000558319 PLPP6Q8IY26 295 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 GALNT16Q8N428 558 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 MEGF10Q96KG7 1140 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 GPR84Q9NQS5 396 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 MMP26Q9NRE1 261 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 OR2M5A3KFT3 312 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 CLEC18AA5D8T8 446 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 OR5K3A6NET4 321 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 SRSF5Q13243 272 aaKnown RBP12.62□□□□□ -0.39
SPG11-210ENST00000558319 CLEC18CQ8NCF0 446 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 VN1R2Q8NFZ6 395 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 C19orf43Q9BQ61 176 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 TMPRSS13Q9BYE2 586 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 BET1LQ9NYM9 111 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 POMT2Q9UKY4 750 aa12.62□□□□□ -0.39
SPG11-210ENST00000558319 KIR2DS1A0A191URI9 304 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 IDSB3KWA1 339 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 FGF17O60258 216 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 SNCGO76070 127 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 CD27P26842 260 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 KIR2DS4P43632 304 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 KIR2DS1Q14954 304 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 ZAR1LA6NP61 321 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 CRXO43186 299 aaPredicted RBP12.61□□□□□ -0.39
SPG11-210ENST00000558319 GPX2P18283 190 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 SMUG1Q53HV7 270 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 FAM162BQ5T6X4 162 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 WDR74Q6RFH5 385 aaPredicted RBP12.61□□□□□ -0.39
SPG11-210ENST00000558319 MRPS24Q96EL2 167 aaKnown RBP12.61□□□□□ -0.39
SPG11-210ENST00000558319 THAP10Q9P2Z0 257 aaPredicted RBP12.61□□□□□ -0.39
SPG11-210ENST00000558319 OR5H8P0DN80 308 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 EPHA2P29317 976 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 ST3GAL2Q16842 350 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 FAM71E1Q6IPT2 247 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 DEFB124Q8NES8 71 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 ACY3Q96HD9 319 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 CDCA4Q9BXL8 241 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 APELAP0DMC3 54 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 CD1EP15812 388 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 HAAOP46952 286 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 TIAL1Q01085 375 aaKnown RBP eCLIP12.61□□□□□ -0.39
SPG11-210ENST00000558319 OR2W3Q7Z3T1 314 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 TGIF2LXQ8IUE1 241 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 OR4D10Q8NGI6 311 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 RTL8AQ9BWD3 113 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 HDAC8Q9BY41 377 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 EGLN1Q9GZT9 426 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 CHRNA7P36544 502 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 PSMB2P49721 201 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 METAP1P53582 386 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 GAMTQ14353 236 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 CLLU1Q5K131 121 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 ABHD17CQ6PCB6 329 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 C20orf196Q8IYI0 205 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 OR1J1Q8NGS3 322 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 FGF14Q92915 247 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 CXorf58Q96LI9 332 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 CSNK1G1Q9HCP0 422 aa12.61□□□□□ -0.39
SPG11-210ENST00000558319 ALKAL1Q6UXT8 129 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 CISD2Q8N5K1 135 aaKnown RBP12.6□□□□□ -0.39
SPG11-210ENST00000558319 GAL3ST2Q9H3Q3 398 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 ZNF391Q9UJN7 358 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 A0A1W2PR48 441 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 ARG1P05089 322 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 CTSLP07711 333 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 ADH4P08319 380 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 PRDX4Q13162 271 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 AFMIDQ63HM1 303 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 MAML2Q8IZL2 1156 aaPredicted RBP12.6□□□□□ -0.39
SPG11-210ENST00000558319 RTN4IP1Q8WWV3 396 aaPredicted RBP12.6□□□□□ -0.39
SPG11-210ENST00000558319 ISOC2Q96AB3 205 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 GABARAPL3Q9BY60 117 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 FGF8P55075 233 aaPredicted RBP12.6□□□□□ -0.39
SPG11-210ENST00000558319 LAIR1Q6GTX8 287 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 ADAMTSL4Q6UY14 1074 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 CAMKMTQ7Z624 323 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 SLC25A37Q9NYZ2 338 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 SH2D7A6NKC9 451 aaPredicted RBP12.6□□□□□ -0.39
SPG11-210ENST00000558319 NID1P14543 1247 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 CST5P28325 142 aaPredicted RBP12.6□□□□□ -0.39
SPG11-210ENST00000558319 ZNF83P51522 516 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 ZNF383Q8NA42 475 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 TMEM230Q96A57 120 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 LINC00052Q96N35 136 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 SH2D1BO14796 132 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 PCK2Q16822 640 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 OR52N4Q8NGI2 321 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 GPX8Q8TED1 209 aa12.6□□□□□ -0.39
SPG11-210ENST00000558319 TCF21O43680 179 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 IGHEP01854 428 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 SLC35E2P0CK97 266 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 HLXQ14774 488 aaPredicted RBP12.59□□□□□ -0.39
SPG11-210ENST00000558319 C19orf35Q6ZS72 473 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 PHYHIPLQ96FC7 376 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 LYRM2Q9NU23 88 aaPredicted RBP12.59□□□□□ -0.39
SPG11-210ENST00000558319 RNF24Q9Y225 148 aa12.59□□□□□ -0.39
SPG11-210ENST00000558319 TCRBV5S2A0A599 114 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms