RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 SMIM6P0DI80 62 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 GIMD1P0DJR0 217 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 GLRA1P23415 457 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 APOBEC1P41238 236 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 CSNK2A1P68400 391 aaPredicted RBP10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 HSD11B2P80365 405 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 AADACL3Q5VUY0 350 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 NSUN5P2Q63ZY6 315 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 DHRS11Q6UWP2 260 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 FOXRED2Q8IWF2 684 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 CSNK2A3Q8NEV1 391 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 OR2AJ1Q8NGZ0 328 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 EMG1Q92979 244 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 EMC6Q9BV81 110 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 ST6GALNAC5Q9BVH7 336 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 DHCR7Q9UBM7 475 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 ATXN7L1Q9ULK2 861 aaPredicted RBP10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 PIAS3Q9Y6X2 628 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF878C9JN71 531 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 S100A6P06703 90 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 RPS2P15880 293 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 EFNA3P52797 238 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 SNU13P55769 128 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 AKIRIN2Q53H80 203 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 TMEM268Q5VZI3 342 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 Q6ZRG5 221 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 FAM219AQ8IW50 185 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 PRSS58Q8IYP2 241 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 DDIT4LQ96D03 193 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 CNTNAP3Q9BZ76 1288 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 OR10A2Q9H208 303 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 SLC22A11Q9NSA0 550 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 EHFQ9NZC4 300 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 ZMAT5Q9UDW3 170 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 PISDQ9UG56 409 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 C14orf166Q9Y224 244 aaKnown RBP10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 PCDH15Q96QU1 1955 aa10.45□□□□□ -0.74
VIPAS39-211ENST00000557658 A0A1W2PP11 408 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 K7EPK0 472 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 SDCBPO00560 298 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 JTBO76095 146 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 GAPDHP04406 335 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 FBLP22087 321 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 RPL12P30050 165 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 RBMXP38159 391 aaKnown RBP10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 DHPSP49366 369 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 SURF2Q15527 256 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 RNF212Q495C1 297 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 FAM71E2Q8N5Q1 922 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 NANPQ8TBE9 248 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF775Q96BV0 537 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 AKR1E2Q96JD6 320 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 GPR84Q9NQS5 396 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 C1orf123Q9NWV4 160 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 KLHL13Q9P2N7 655 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 CACFD1Q9UGQ2 172 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 CYP8B1Q9UNU6 501 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 TIMM10BQ9Y5J6 103 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 GON4LQ3T8J9 2241 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 FAM157AC9JC47 383 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 C9JQL5 133 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 LINC01387J3KSC0 135 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 ADAM10O14672 748 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 SGCEO43556 437 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 IFNA2P01563 188 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF708P17019 499 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 CPT2P23786 658 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 IAH1Q2TAA2 248 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 C9orf50Q5SZB4 431 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 THEM4Q5T1C6 240 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 OR8B12Q8NGG6 310 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 OR51T1Q8NGJ9 327 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 HIST1H2BAQ96A08 127 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 ZDHHC12Q96GR4 267 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 FAM71F1Q96KD3 344 aaPredicted RBP10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 CLCC1Q96S66 551 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 ALKBH4Q9NXW9 302 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 LHFPL6Q9Y693 200 aa10.44□□□□□ -0.74
VIPAS39-211ENST00000557658 PMS2P1A4D2B8 440 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 C5orf52A6NGY3 159 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 GLAP06280 429 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF806P0C7X5 589 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 FCGR2CP31995 323 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 C17orf67Q0P5P2 114 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 SMAD2Q15796 467 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 EIF2S3LQ2VIR3 472 aaKnown RBP10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 CHRFAM7AQ494W8 412 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 OR2A2Q6IF42 318 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 OPN5Q6U736 354 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 TMPRSS9Q7Z410 1059 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF561Q8N587 486 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 SOX7Q9BT81 388 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 ZNF304Q9HCX3 659 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 RPS10P5Q9NQ39 176 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 SERINC1Q9NRX5 453 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 FBXL17Q9UF56 701 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 SUSD2Q9UGT4 822 aa10.43□□□□□ -0.74
VIPAS39-211ENST00000557658 MMP17Q9ULZ9 603 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms