RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 NKX2-6A6NCS4 301 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 POLR1CO15160 346 aaPredicted RBP3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 MRPS12O15235 138 aaKnown RBP3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 HSBP1O75506 76 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 FARS2O95363 451 aaKnown RBP3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 APOA1P02647 267 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 DUX4L2P0CJ85 424 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 DUX4L3P0CJ86 424 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 DUX4L4P0CJ87 422 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 DUX4L5P0CJ88 424 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 DUX4L6P0CJ89 424 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 DUX4L7P0CJ90 424 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 ZNF250P15622 560 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 PMCHP20382 165 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 CD9P21926 228 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 PRKACBP22694 351 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 GLP1RP43220 463 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 VDAC2P45880 294 aaPredicted RBP3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 OR3A4PP47883 348 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 NPBWR2P48146 333 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 NOVP48745 357 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 TRAM2Q15035 370 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 ATP6AP1Q15904 470 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 PRR4Q16378 134 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 CASC10Q5T4H9 136 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 GPR157Q5UAW9 335 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 C1orf146Q5VVC0 180 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 FAAP20Q6NZ36 180 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 DUX4L9Q6RFH8 374 aaPredicted RBP3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 TFAP2EQ6VUC0 442 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 FAM220AQ7Z4H9 259 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 ZNF329Q86UD4 541 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 ZNF589Q86UQ0 364 aaPredicted RBP3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 APRG1Q8IVJ8 170 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 TRAM1L1Q8N609 369 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 TMEM252Q8N6L7 170 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 WDSUB1Q8N9V3 476 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 CCDC71LQ8N9Z2 235 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 CCDC112Q8NEF3 446 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 OR10G3Q8NGC4 313 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 LMX1AQ8TE12 382 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 RASL10AQ92737 203 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 CIDECQ96AQ7 238 aaPredicted RBP3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 CCDC127Q96BQ5 260 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 VSIG2Q96IQ7 327 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 TSG101Q99816 390 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 ECSITQ9BQ95 431 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 TM6SF2Q9BZW4 377 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 C20orf85Q9H1P6 137 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 MED29Q9NX70 200 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 SLC39A1Q9NY26 324 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 CALYQ9NYX4 217 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 ABCD2Q9UBJ2 740 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 DUX4Q9UBX2 424 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 LGALS13Q9UHV8 139 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 GNPTGQ9UJJ9 305 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 GOLT1BQ9Y3E0 138 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 SAR1BQ9Y6B6 198 aa3.67□□□□□ -1.82
MTHFD1-216ENST00000557539 PLIN4Q96Q06 1357 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 TRAV19A0A0A6YYK7 116 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 HSBP1L1C9JCN9 74 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 F6UB75 175 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 HCRTR1O43613 425 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 CLDN11O75508 207 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 LYPLA1O75608 230 aaPredicted RBP3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 EIF3GO75821 320 aaKnown RBP eCLIP3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 IGKV3-20P01619 116 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 CTRB1P17538 263 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 CFHR2P36980 270 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 AQP2P41181 271 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 GPR1P46091 355 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 GPR6P46095 362 aaPredicted RBP3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 RORCP51449 518 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 UGT2B15P54855 530 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 STXBP1P61764 594 aaKnown RBP3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 RCAN2Q14206 197 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 NCF4Q15080 339 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 GABRA6Q16445 453 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 CTRB2Q6GPI1 263 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 Q6ZS92 163 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 MOB1BQ7L9L4 216 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 ZBED8Q8IZ13 594 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 OR9G1Q8NH87 305 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 OR5K2Q8NHB8 316 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 NDNFQ8TB73 568 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 TCP10LQ8TDR4 215 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 ACOT11Q8WXI4 607 aaPredicted RBP3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 ZNF184Q99676 751 aaPredicted RBP3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 CNPY3Q9BT09 278 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 PRRG3Q9BZD7 231 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 TRIM15Q9C019 465 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 PTGES2Q9H7Z7 377 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 SIAEQ9HAT2 523 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 NTN4Q9HB63 628 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 ACP6Q9NPH0 428 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 IL26Q9NPH9 171 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 PRSS16Q9NQE7 514 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 EXD2Q9NVH0 621 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 QPCTLQ9NXS2 382 aa3.66□□□□□ -1.82
MTHFD1-216ENST00000557539 ZNF256Q9Y2P7 627 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms