RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, human

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCFD1-223	ENST00000557076	ATPAF1	Q5TC12	328 aa	Predicted RBP	3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	TEX36	Q5VZQ5	186 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	HCP5	Q6MZN7	132 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	KCTD18	Q6PI47	426 aa	Predicted RBP	3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	SLC25A47	Q6Q0C1	308 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	CCDC121	Q6ZUS5	278 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	FOXL2NB	Q6ZUU3	175 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	SLC30A8	Q8IWU4	369 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	PNKD	Q8N490	385 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	CLDN22	Q8N7P3	220 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	ANKRD42	Q8N9B4	389 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	FNDC8	Q8TC99	324 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	ST8SIA4	Q92187	359 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	ISOC1	Q96CN7	298 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	RBP7	Q96R05	134 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	PANX1	Q96RD7	426 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	ECSIT	Q9BQ95	431 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	SLC22A4	Q9H015	551 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	MYLK2	Q9H1R3	596 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	EDA2R	Q9HAV5	297 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	UFSP2	Q9NUQ7	469 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	DNAJB11	Q9UBS4	358 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	ZNF229	Q9UJW7	825 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	PITPNC1	Q9UKF7	332 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	PRPF19	Q9UMS4	504 aa	Known RBP	3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	LRP12	Q9Y561	859 aa		3.74	□□□□□ -1.81
SCFD1-223	ENST00000557076	HECTD4	Q9Y4D8	3996 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	IGKV1D-43	A0A0B4J1Z2	117 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	TMEM247	A6NEH6	219 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	FAM90A8P	A6NJQ4	464 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	NPIPB13	A6NJU9	1138 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	NPIPB4	C9JG80	1138 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	PRR23D1	E9PI22	279 aa	Predicted RBP	3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	BLOC1S5-TXNDC5	H3BN57	136 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	POLR3G	O15318	223 aa	Predicted RBP	3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	GMDS	O60547	372 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	TPST2	O60704	377 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	RHBDL1	O75783	438 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	SLC2A10	O95528	541 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	SERPINE1	P05121	402 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	CHRNG	P07510	517 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	PRR23D2	P0DMB1	279 aa	Predicted RBP	3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	HTR5A	P47898	357 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	RAB13	P51153	203 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	DAP3	P51398	398 aa	Known RBP	3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	CLNS1A	P54105	237 aa	Known RBP	3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	UGT2B15	P54855	530 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	DLX1	P56177	255 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	PRB3	Q04118	309 aa	Predicted RBP	3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	SCRN3	Q0VDG4	424 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	KLRD1	Q13241	179 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	ENDOG	Q14249	297 aa	Known RBP	3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	MICB	Q29980	383 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	SPANXN4	Q5MJ08	99 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	CEP85L	Q5SZL2	805 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	HHAT	Q5VTY9	493 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	DHRS4L2	Q6PKH6	230 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	COLCA1	Q6ZS62	124 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076		Q6ZWC4	215 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	SLC36A1	Q7Z2H8	476 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	KRT77	Q7Z794	578 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	C10orf107	Q8IVU9	208 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	C11orf42	Q8N5U0	333 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	NOXO1	Q8NFA2	376 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	OR4X2	Q8NGF9	303 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	OR52H1	Q8NGJ2	320 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	GATAD1	Q8WUU5	269 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	HDAC2	Q92769	488 aa	Known RBP	3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	APOBEC3D	Q96AK3	386 aa	Predicted RBP	3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	TMEM19	Q96HH6	336 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	ZIM3	Q96PE6	472 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	PRR25	Q96S07	402 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	ALG12	Q9BV10	488 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	NUF2	Q9BZD4	464 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	EVA1A	Q9H8M9	152 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	HEXA-AS1	Q9H8Q6	139 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	MEAF6	Q9HAF1	191 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	SLCO1B3	Q9NPD5	702 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	TCF19	Q9Y242	345 aa		3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076	NOP16	Q9Y3C1	178 aa	Known RBP	3.73	□□□□□ -1.81
SCFD1-223	ENST00000557076		A0A1W2PPM1	405 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	OR6C6	A6NF89	314 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	MCIDAS	D6RGH6	385 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	ZSCAN12	O43309	604 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	SGCE	O43556	437 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	NDUFB3	O43676	98 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	TPST1	O60507	370 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	BCHE	P06276	602 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	TSPAN19	P0C672	248 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	ZCCHC18	P0CG32	403 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	MSR1	P21757	451 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	BGN	P21810	368 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	MYF6	P23409	242 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	SERPINB5	P36952	375 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	CDKN2C	P42773	168 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	GSK3B	P49841	420 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	DYNLT3	P51808	116 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	LINC00205	P59089	165 aa		3.72	□□□□□ -1.81
SCFD1-223	ENST00000557076	DSTN	P60981	165 aa		3.72	□□□□□ -1.81

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