RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 DVL1P1P54792 670 aaPredicted RBP8.99□□□□□ -0.97
LINC00239-201ENST00000556973 ADARB1P78563 741 aaKnown RBP8.99□□□□□ -0.97
LINC00239-201ENST00000556973 SLC34A1Q06495 639 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 MFGE8Q08431 387 aaPredicted RBP8.99□□□□□ -0.97
LINC00239-201ENST00000556973 RIPPLY1Q0D2K3 151 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 RAB40BQ12829 278 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 IL18R1Q13478 541 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 KLHL22Q53GT1 634 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 BCL2L15Q5TBC7 163 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 ZBTB37Q5TC79 503 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 ZNF691Q5VV52 312 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 PRAMEF6Q5VXH4 476 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 FAM220AQ7Z4H9 259 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 COMMD2Q86X83 199 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 ELMOD2Q8IZ81 293 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 MUC20Q8N307 709 aaPredicted RBP8.99□□□□□ -0.97
LINC00239-201ENST00000556973 SPICQ8N5J4 248 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 SETD9Q8NE22 299 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 SEMA6DQ8NFY4 1073 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 PIGCQ92535 297 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 LGALS12Q96DT0 336 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 MRPL48Q96GC5 212 aaKnown RBP8.99□□□□□ -0.97
LINC00239-201ENST00000556973 HIST1H2AAQ96QV6 131 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 MICU1Q9BPX6 476 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 PAPOLGQ9BWT3 736 aaKnown RBP8.99□□□□□ -0.97
LINC00239-201ENST00000556973 VCXQ9H320 206 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 GPR84Q9NQS5 396 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 UFSP2Q9NUQ7 469 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 RNF7Q9UBF6 113 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 GNG8Q9UK08 70 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 GTF2A1LQ9UNN4 478 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 PPIAL4AQ9Y536 164 aa8.99□□□□□ -0.97
LINC00239-201ENST00000556973 ZNF816-ZNF321PA0A0X1KG74 233 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 ZNF850A8MQ14 1090 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 H0YAE9 185 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 FAM20BO75063 409 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 DHRS3O75911 302 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 MSMBP08118 114 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 PCMT1P22061 227 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 MDH2P40926 338 aaKnown RBP8.98□□□□□ -0.97
LINC00239-201ENST00000556973 ISL1P61371 349 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 ZNF91Q05481 1191 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 HNRNPA0Q13151 305 aaKnown RBP8.98□□□□□ -0.97
LINC00239-201ENST00000556973 PRDX4Q13162 271 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 GALEQ14376 348 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 ZMYND11Q15326 602 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 CDONQ4KMG0 1287 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 FAM76BQ5HYJ3 339 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 Q6ZSR3 168 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 THAP5Q7Z6K1 395 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 CATSPERDQ86XM0 798 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 OR51F2Q8NH61 342 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 APH1BQ8WW43 257 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 CYGBQ8WWM9 190 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 OR5P3Q8WZ94 311 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 RORBQ92753 470 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 DVL3Q92997 716 aaPredicted RBP8.98□□□□□ -0.97
LINC00239-201ENST00000556973 ITPKCQ96DU7 683 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 RTL8AQ9BWD3 113 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 PPP1R3EQ9H7J1 279 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 RNPEPL1Q9HAU8 725 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 PATZ1Q9HBE1 687 aaKnown RBP8.98□□□□□ -0.97
LINC00239-201ENST00000556973 TMEM165Q9HC07 324 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 AMBNQ9NP70 447 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 INPP5EQ9NRR6 644 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 C1orf123Q9NWV4 160 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 UBAP1Q9NZ09 502 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 LPAR3Q9UBY5 353 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 NKX1-2Q9UD57 310 aaPredicted RBP8.98□□□□□ -0.97
LINC00239-201ENST00000556973 CDC42EP3Q9UKI2 254 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 HSPE1-MOB4S4R3N1 261 aa8.98□□□□□ -0.97
LINC00239-201ENST00000556973 TRAV20A0A0B4J274 112 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 A6NLC8 198 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 TMEM210A6NLX4 147 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 DHRS7CA6NNS2 312 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 WBP4O75554 376 aaKnown RBP8.97□□□□□ -0.97
LINC00239-201ENST00000556973 FOXH1O75593 365 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 CLIC3O95833 236 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 WNT2P09544 360 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 RBMXP38159 391 aaKnown RBP8.97□□□□□ -0.97
LINC00239-201ENST00000556973 CAPGP40121 348 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 ACTA2P62736 377 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 ACTG2P63267 376 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 KCNJ8Q15842 424 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 CEACAM21Q3KPI0 293 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 CHRFAM7AQ494W8 412 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 ZNF404Q494X3 552 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 TP53I3Q53FA7 332 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 FDX2Q6P4F2 183 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 DOK3Q7L591 496 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 LHFPL3Q86UP9 236 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 GLCCI1Q86VQ1 547 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 C11orf53Q8IXP5 236 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 ZDHHC23Q8IYP9 409 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 CCDC54Q8NEL0 328 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 OR1M1Q8NGA1 313 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 OR5A2Q8NGI9 324 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 OR14K1Q8NGZ2 314 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 TMEM186Q96B77 213 aa8.97□□□□□ -0.97
LINC00239-201ENST00000556973 RNF170Q96K19 258 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms