RNA–Protein interactions for RNA: ENST00000556737.1

SHMT2-224, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-224ENST00000556737 EFCAB10A6NFE3 127 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 PPIAL4DF5H284 164 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 TRAPPC2LH3BP13 241 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 RGS10O43665 173 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 TCF21O43680 179 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 FOXH1O75593 365 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 ZNF205O95201 554 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 APOL3O95236 402 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 FSTL3O95633 263 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 CCDC159P0C7I6 412 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 PPIAL4FP0DN26 164 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 CA6P23280 308 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 CRHBPP24387 322 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 GABARAPL2P60520 117 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 CXCR4P61073 352 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 PAX2Q02962 417 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 ZNF91Q05481 1191 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 MPPED2Q15777 294 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 ZNF404Q494X3 552 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 NXNL2Q5VZ03 156 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 LAIR2Q6ISS4 152 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 MUC20Q8N307 709 aaPredicted RBP8.65□□□□□ -1.02
SHMT2-224ENST00000556737 KLHL36Q8N4N3 616 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 DEFB108BQ8NET1 73 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 OR56B2PQ8NGI1 322 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 OTOSQ8NHW6 89 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 SPRYD4Q8WW59 207 aaPredicted RBP8.65□□□□□ -1.02
SHMT2-224ENST00000556737 DACT3Q96B18 629 aaPredicted RBP8.65□□□□□ -1.02
SHMT2-224ENST00000556737 RNFT2Q96EX2 444 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 C19orf24Q9BVV8 132 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 ZNF696Q9H7X3 374 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 VCX3AQ9NNX9 186 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 MMP26Q9NRE1 261 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 MRPL15Q9P015 296 aaKnown RBP8.65□□□□□ -1.02
SHMT2-224ENST00000556737 ZNF319Q9P2F9 582 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 ERVK-18Q9QC07 812 aa8.65□□□□□ -1.02
SHMT2-224ENST00000556737 IRGMA1A4Y4 181 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 GGT3PA6NGU5 568 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 SLC22A31A6NKX4 558 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 PRR32B1ATL7 298 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 XRCC2O43543 280 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 GMDSO60547 372 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 VENTXO95231 258 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 MRPL3P09001 348 aaKnown RBP8.64□□□□□ -1.03
SHMT2-224ENST00000556737 DBTP11182 482 aaKnown RBP8.64□□□□□ -1.03
SHMT2-224ENST00000556737 ZNF12P17014 697 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 ADRA2CP18825 462 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 EPHA1P21709 976 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 GATA3P23771 443 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 HSD11B1P28845 292 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 HTR1FP30939 366 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 NAA10P41227 235 aaPredicted RBP8.64□□□□□ -1.03
SHMT2-224ENST00000556737 MTNR1AP48039 350 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 ZNF121P58317 390 aaPredicted RBP8.64□□□□□ -1.03
SHMT2-224ENST00000556737 FAM3AP98173 230 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 TAF13Q15543 124 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 OR8G1Q15617 311 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 TUSC1Q2TAM9 212 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 KLHL22Q53GT1 634 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 SLC35D3Q5M8T2 416 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 AADACL4Q5VUY2 407 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 RHOUQ7L0Q8 258 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 MEPCEQ7L2J0 689 aaKnown RBP8.64□□□□□ -1.03
SHMT2-224ENST00000556737 SHFQ7M4L6 423 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 SLC16A9Q7RTY1 509 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 WDR86Q86TI4 376 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 KLBQ86Z14 1044 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 OR51G2Q8NGK0 314 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 GGHQ92820 318 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 TMEM246Q9BRR3 403 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 MRPS26Q9BYN8 205 aaKnown RBP8.64□□□□□ -1.03
SHMT2-224ENST00000556737 SLC22A4Q9H015 551 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 TMEM165Q9HC07 324 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 CHCHD3Q9NX63 227 aaKnown RBP8.64□□□□□ -1.03
SHMT2-224ENST00000556737 WARS2Q9UGM6 360 aaKnown RBP8.64□□□□□ -1.03
SHMT2-224ENST00000556737 METRNQ9UJH8 293 aa8.64□□□□□ -1.03
SHMT2-224ENST00000556737 TBX1O43435 398 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 FADS2O95864 444 aaKnown RBP8.63□□□□□ -1.03
SHMT2-224ENST00000556737 MT-ND2P03891 347 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 ANXA2P07355 339 aaKnown RBP8.63□□□□□ -1.03
SHMT2-224ENST00000556737 WNT2P09544 360 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 RPS2P15880 293 aaKnown RBP8.63□□□□□ -1.03
SHMT2-224ENST00000556737 MYL12AP19105 171 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 SLC15A1P46059 708 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 PSMA6P60900 246 aaKnown RBP8.63□□□□□ -1.03
SHMT2-224ENST00000556737 ST3GAL4Q11206 333 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 NEDD8Q15843 81 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 SLC25A30Q5SVS4 291 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 ZNF773Q6PK81 442 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 LYPD2Q6UXB3 125 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 FAM57BQ71RH2 274 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 SVOPQ8N4V2 548 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 ZNF454Q8N9F8 522 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 SGCDQ92629 289 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 ERGIC1Q969X5 290 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 SGK3Q96BR1 496 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 TMEM80Q96HE8 168 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 REEP6Q96HR9 211 aa8.63□□□□□ -1.03
SHMT2-224ENST00000556737 CNN2Q99439 309 aaKnown RBP8.63□□□□□ -1.03
SHMT2-224ENST00000556737 C7orf69Q9H7B7 122 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms