RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 ZNF823P16415 610 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 SAA4P35542 130 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 UBE2E1P51965 193 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 EFNB2P52799 333 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 DLX1P56177 255 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 ELF3P78545 371 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-223ENST00000556689 ACSM1Q08AH1 577 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 DBPQ10586 325 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-223ENST00000556689 PCK2Q16822 640 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 OXLD1Q5BKU9 147 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 FGD3Q5JSP0 725 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 WDR38Q5JTN6 314 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 GLYATL3Q5SZD4 288 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 GLYATQ6IB77 296 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 LCN8Q6JVE9 175 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 DUX4L9Q6RFH8 374 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-223ENST00000556689 DRAM2Q6UX65 266 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 C11orf53Q8IXP5 236 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 LNX2Q8N448 690 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 OR8S1Q8NH09 359 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 OR4K13Q8NH42 304 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 PPP1R35Q8TAP8 253 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 LRRC29Q8WV35 223 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 SGCDQ92629 289 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 MAP6Q96JE9 813 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 HSH2DQ96JZ2 352 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 FAM234AQ9H0X4 552 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 NECAP2Q9NVZ3 263 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 GMPR2Q9P2T1 348 aaKnown RBP10.36□□□□□ -0.75
SHMT2-223ENST00000556689 DUX4Q9UBX2 424 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 CD300AQ9UGN4 299 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 KCNG2Q9UJ96 466 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 POMPQ9Y244 141 aa10.36□□□□□ -0.75
SHMT2-223ENST00000556689 KMT2CQ8NEZ4 4911 aaKnown RBP10.36□□□□□ -0.75
SHMT2-223ENST00000556689 TET2Q6N021 2002 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-223ENST00000556689 AQP12BA6NM10 295 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 ANKRD30BLA7E2S9 258 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 XPNPEP2O43895 674 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 RHCEP18577 417 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 NOS3P29474 1203 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 SLC6A6P31641 620 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 DDOSTP39656 456 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 NAA10P41227 235 aaPredicted RBP10.35□□□□□ -0.75
SHMT2-223ENST00000556689 TGM4P49221 684 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 KLRD1Q13241 179 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 IKZF1Q13422 519 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 FAM98BQ52LJ0 330 aaKnown RBP10.35□□□□□ -0.75
SHMT2-223ENST00000556689 LRRC10Q5BKY1 277 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 DPY19L4Q7Z388 723 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 AQP12AQ8IXF9 295 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 PNKDQ8N490 385 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 FAM216BQ8N7L0 139 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 DTX3Q8N9I9 347 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 BEND2Q8NDZ0 799 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 OR56B2PQ8NGI1 322 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 OR4C13Q8NGP0 309 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 OR2T6Q8NHC8 308 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 TNFRSF14Q92956 283 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 C12orf43Q96C57 262 aaKnown RBP10.35□□□□□ -0.75
SHMT2-223ENST00000556689 SSX3Q99909 188 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 DCTN5Q9BTE1 182 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 OPA3Q9H6K4 179 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 GORASP2Q9H8Y8 452 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.35□□□□□ -0.75
SHMT2-223ENST00000556689 MRPL22Q9NWU5 206 aaKnown RBP10.35□□□□□ -0.75
SHMT2-223ENST00000556689 N6AMT1Q9Y5N5 214 aa10.35□□□□□ -0.75
SHMT2-223ENST00000556689 TRBV4-1A0A0J9YWV2 114 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 OR6C68A6NDL8 312 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 H3BUX3 64 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 ACOT8O14734 319 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 IDH3BO43837 385 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 NCK1P16333 377 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 OTX1P32242 354 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-223ENST00000556689 EMX1Q04741 257 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-223ENST00000556689 SEC23BQ15437 767 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 ATPAF1Q5TC12 328 aaPredicted RBP10.34□□□□□ -0.75
SHMT2-223ENST00000556689 NCR3LG1Q68D85 454 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 ZFP1Q6P2D0 407 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 PGBD2Q6P3X8 592 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 CYP2R1Q6VVX0 501 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 KLHDC1Q8N7A1 406 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 OR1M1Q8NGA1 313 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 OR4S1Q8NGB4 309 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 OR9Q1Q8NGQ5 310 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 C8orf46Q8TAG6 207 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 H1FXQ92522 213 aaKnown RBP10.34□□□□□ -0.75
SHMT2-223ENST00000556689 ITPKCQ96DU7 683 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 IFT27Q9BW83 186 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 METTL8Q9H825 291 aaKnown RBP10.34□□□□□ -0.75
SHMT2-223ENST00000556689 NDUFAF4Q9P032 175 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 SF3B6Q9Y3B4 125 aaKnown RBP10.34□□□□□ -0.75
SHMT2-223ENST00000556689 RRP15Q9Y3B9 282 aaKnown RBP10.34□□□□□ -0.75
SHMT2-223ENST00000556689 MAB21L2Q9Y586 359 aa10.34□□□□□ -0.75
SHMT2-223ENST00000556689 DHRS12A0PJE2 317 aa10.33□□□□□ -0.76
SHMT2-223ENST00000556689 M0R1W7 72 aa10.33□□□□□ -0.76
SHMT2-223ENST00000556689 TIPRLO75663 272 aa10.33□□□□□ -0.76
SHMT2-223ENST00000556689 VSIG10L2P0DP72 767 aa10.33□□□□□ -0.76
SHMT2-223ENST00000556689 FCGR1AP12314 374 aa10.33□□□□□ -0.76
SHMT2-223ENST00000556689 AMY2BP19961 511 aa10.33□□□□□ -0.76
SHMT2-223ENST00000556689 ANOS1P23352 680 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms