RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 SLC26A10Q8NG04 563 aa6.9□□□□□ -1.31
CHD8-209ENST00000555935 OR13C9Q8NGT0 318 aa6.9□□□□□ -1.31
CHD8-209ENST00000555935 TCTN2Q96GX1 697 aa6.9□□□□□ -1.31
CHD8-209ENST00000555935 PIGQQ9BRB3 760 aa6.9□□□□□ -1.31
CHD8-209ENST00000555935 C2orf88Q9BSF0 95 aa6.9□□□□□ -1.31
CHD8-209ENST00000555935 NICN1Q9BSH3 213 aa6.9□□□□□ -1.31
CHD8-209ENST00000555935 SMIM3Q9BZL3 60 aa6.9□□□□□ -1.31
CHD8-209ENST00000555935 OR11A1Q9GZK7 315 aa6.9□□□□□ -1.31
CHD8-209ENST00000555935 PTGES2Q9H7Z7 377 aa6.9□□□□□ -1.31
CHD8-209ENST00000555935 SIRT7Q9NRC8 400 aa6.9□□□□□ -1.31
CHD8-209ENST00000555935 FAM86C1Q9NVL1 165 aa6.9□□□□□ -1.31
CHD8-209ENST00000555935 COA3Q9Y2R0 106 aaPredicted RBP6.9□□□□□ -1.31
CHD8-209ENST00000555935 A0A0A6YYD4 124 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 FAM221BA6H8Z2 402 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 HIDE1A8MVS5 230 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 CLDN4O14493 209 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 ADAM10O14672 748 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 GPR137BO60478 399 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 DXOO77932 396 aaKnown RBP6.89□□□□□ -1.31
CHD8-209ENST00000555935 UTS2O95399 124 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 PRH1P02810 166 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 H2BFMP0C1H6 154 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 PVRP15151 417 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 SPCS3P61009 180 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 ARFRP1Q13795 201 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 RSU1Q15404 277 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 ZNF674Q2M3X9 581 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 OR8G5Q8NG78 346 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 PHOSPHO2Q8TCD6 241 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 ELSPBP1Q96BH3 223 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 VWCEQ96DN2 955 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 ADAT3Q96EY9 351 aaPredicted RBP6.89□□□□□ -1.31
CHD8-209ENST00000555935 RHOVQ96L33 236 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 IER2Q9BTL4 223 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 URM1Q9BTM9 101 aaKnown RBP6.89□□□□□ -1.31
CHD8-209ENST00000555935 TMEM59Q9BXS4 323 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 PARP12Q9H0J9 701 aaKnown RBP6.89□□□□□ -1.31
CHD8-209ENST00000555935 ZDHHC4Q9NPG8 344 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHD8-209ENST00000555935 SLC2A4RGQ9NR83 387 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 PRTFDC1Q9NRG1 225 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 FAM206AQ9NX38 181 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 TCFL5Q9UL49 500 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 MRPS28Q9Y2Q9 187 aaKnown RBP6.89□□□□□ -1.31
CHD8-209ENST00000555935 FBXO7Q9Y3I1 522 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 A6NCN8 305 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 A6NIZ1 184 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 H7C1Q1 480 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 TGOLN2O43493 480 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 CDC14BO60729 498 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 PTBP3O95758 552 aaKnown RBP6.89□□□□□ -1.31
CHD8-209ENST00000555935 MPIG6BO95866 241 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 TTRP02766 147 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 OR13C7P0DN81 318 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 PTGER4P35408 488 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 VIPR2P41587 438 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 AFF3P51826 1226 aaKnown RBP6.89□□□□□ -1.31
CHD8-209ENST00000555935 RAP1BP61224 184 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 CSNK2A1P68400 391 aaPredicted RBP6.89□□□□□ -1.31
CHD8-209ENST00000555935 NKX6-1P78426 367 aaPredicted RBP6.89□□□□□ -1.31
CHD8-209ENST00000555935 HIKESHIQ53FT3 197 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 KLHL24Q6TFL4 600 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 GLIPR1L1Q6UWM5 242 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 CHRDL2Q6WN34 429 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 SGPP2Q8IWX5 399 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 HIST3H2BBQ8N257 126 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 MRPL43Q8N983 215 aaKnown RBP6.89□□□□□ -1.31
CHD8-209ENST00000555935 CSNK2A3Q8NEV1 391 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 SLC25A43Q8WUT9 341 aaPredicted RBP6.89□□□□□ -1.31
CHD8-209ENST00000555935 RNF133Q8WVZ7 376 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 OR1E3Q8WZA6 343 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 ZNF524Q96C55 264 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 MEGF10Q96KG7 1140 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 SSX3Q99909 188 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 C8orf33Q9H7E9 229 aaPredicted RBP6.89□□□□□ -1.31
CHD8-209ENST00000555935 EHFQ9NZC4 300 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 PUS1Q9Y606 427 aaKnown RBP eCLIP6.89□□□□□ -1.31
CHD8-209ENST00000555935 FANCMQ8IYD8 2048 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 SPTBP11277 2137 aa6.89□□□□□ -1.31
CHD8-209ENST00000555935 HEATR5AQ86XA9 2040 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 TRBV23OR9-2A0A075B6M9 112 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 A0A087X0M5 115 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 A0A1B0GX30 115 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 BTBD17A6NE02 478 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 TLCD2A6NGC4 264 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 MASP2O00187 686 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 TERTO14746 1132 aaKnown RBP6.88□□□□□ -1.31
CHD8-209ENST00000555935 SOCS1O15524 211 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 HIST1H2BKO60814 126 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 HIST1H2BJP06899 126 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 PAX1P15863 534 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 ZNF20P17024 532 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 HIST1H2BOP23527 126 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 HIST1H2BBP33778 126 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 GALNSP34059 522 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 SEC13P55735 322 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 HIST1H2BDP58876 126 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 HIST1H2BCP62807 126 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 UBE2V2Q15819 145 aa6.88□□□□□ -1.31
CHD8-209ENST00000555935 HIST2H2BEQ16778 126 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms