RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 GATAD2BQ8WXI9 593 aa12.82□□□□□ -0.36
SNX6-205ENST00000555648 ST8SIA4Q92187 359 aa12.82□□□□□ -0.36
SNX6-205ENST00000555648 HIST1H2AAQ96QV6 131 aa12.82□□□□□ -0.36
SNX6-205ENST00000555648 RTL8AQ9BWD3 113 aa12.82□□□□□ -0.36
SNX6-205ENST00000555648 RASSF4Q9H2L5 321 aa12.82□□□□□ -0.36
SNX6-205ENST00000555648 ABCB9Q9NP78 766 aa12.82□□□□□ -0.36
SNX6-205ENST00000555648 CTSZQ9UBR2 303 aa12.82□□□□□ -0.36
SNX6-205ENST00000555648 hCG_38984A0A1B0GV85 526 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 DVL1O14640 695 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 PRODHO43272 600 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 HOXA3O43365 443 aaPredicted RBP12.81□□□□□ -0.36
SNX6-205ENST00000555648 SELENOFO60613 162 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 CBX1P83916 185 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 POU4F2Q12837 409 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 PDCD1Q15116 288 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 TUSC1Q2TAM9 212 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 DEFB112Q30KQ8 113 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 C11orf91Q3C1V1 193 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 SLC35D3Q5M8T2 416 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 BTN2A1Q7KYR7 527 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 TRPM8Q7Z2W7 1104 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 FAM90A1Q86YD7 464 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 CPOQ8IVL8 374 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 OTOSQ8NHW6 89 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 FAM81AQ8TBF8 368 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 C1orf147Q96MC9 270 aaPredicted RBP12.81□□□□□ -0.36
SNX6-205ENST00000555648 WDFY2Q96P53 400 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 NIPAL2Q9H841 368 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 UNKLQ9H9P5 680 aaKnown RBP12.81□□□□□ -0.36
SNX6-205ENST00000555648 NOX4Q9NPH5 578 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 TNFRSF19Q9NS68 423 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 DNAJB11Q9UBS4 358 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 LAMP5Q9UJQ1 280 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 RHBDD3Q9Y3P4 386 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 MPC1Q9Y5U8 109 aa12.81□□□□□ -0.36
SNX6-205ENST00000555648 SOX21Q9Y651 276 aaPredicted RBP12.81□□□□□ -0.36
SNX6-205ENST00000555648 MDFIC2A0A1B0GVS7 189 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 POM121CA8CG34 1229 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 NDUFB3O43676 98 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 LHBP01229 141 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 SFTPBP07988 381 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 EGR1P18146 543 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 CSNK2BP67870 215 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 TEX36Q5VZQ5 186 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 KRT77Q7Z794 578 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 COMMD2Q86X83 199 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 GALNT4Q8N4A0 578 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 SCCPDHQ8NBX0 429 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 PIGCQ92535 297 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 FAM71F1Q96KD3 344 aaPredicted RBP12.8□□□□□ -0.36
SNX6-205ENST00000555648 AMELYQ99218 206 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 CNTD2Q9H8S5 307 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 SMURF1Q9HCE7 757 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 DNAJB9Q9UBS3 223 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 ZNF391Q9UJN7 358 aa12.8□□□□□ -0.36
SNX6-205ENST00000555648 NKX6-3A6NJ46 265 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 TMEM210A6NLX4 147 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 ZNF850A8MQ14 1090 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 CDIPTO14735 213 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 FKBP6O75344 327 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 PRKACGP22612 351 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 GMFBP60983 142 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 ARF6P62330 175 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 CDK5Q00535 292 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 PRDX4Q13162 271 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 SNAPC1Q16533 368 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 LRRC10Q5BKY1 277 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 LCN1P1Q5VSP4 162 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 RUSC1-AS1Q66K80 236 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 KCTD18Q6PI47 426 aaPredicted RBP12.79□□□□□ -0.36
SNX6-205ENST00000555648 WDR82Q6UXN9 313 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 PRSS45Q7RTY3 260 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 TMEM179BQ7Z7N9 219 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 CMTM4Q8IZR5 234 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 DNAJC9Q8WXX5 260 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 LHX4Q969G2 390 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 C12orf43Q96C57 262 aaKnown RBP12.79□□□□□ -0.36
SNX6-205ENST00000555648 RNF170Q96K19 258 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 CCL13Q99616 98 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 PRRG3Q9BZD7 231 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 TVP23BQ9NYZ1 205 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 KAAG1Q9UBP8 84 aa12.79□□□□□ -0.36
SNX6-205ENST00000555648 SRRM5B3KS81 715 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 DYNC1I1O14576 645 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 TNFRSF13BO14836 293 aaPredicted RBP12.78□□□□□ -0.36
SNX6-205ENST00000555648 PSMA6P60900 246 aaKnown RBP12.78□□□□□ -0.36
SNX6-205ENST00000555648 IKZF1Q13422 519 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 APOFQ13790 326 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 WDR38Q5JTN6 314 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 WDR86Q86TI4 376 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 ZDHHC23Q8IYP9 409 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 HS3ST5Q8IZT8 346 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 PAPD5Q8NDF8 572 aaKnown RBP12.78□□□□□ -0.36
SNX6-205ENST00000555648 TBC1D15Q8TC07 691 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 BCAS4Q8TDM0 211 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 TMIGD2Q96BF3 282 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 TBX15Q96SF7 602 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 MROQ9BYG7 248 aa12.78□□□□□ -0.36
SNX6-205ENST00000555648 PAPOLBQ9NRJ5 636 aaKnown RBP12.78□□□□□ -0.36
SNX6-205ENST00000555648 ACOXLQ9NUZ1 547 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms