RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 SLC2A3P11169 496 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 MYL9P24844 172 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 PBLDP30039 288 aaPredicted RBP0.79□□□□□ -2.28
SNX6-204ENST00000555541 RAB9AP51151 201 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 PPP1CAP62136 330 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 MRPL2Q5T653 305 aaKnown RBP0.79□□□□□ -2.28
SNX6-204ENST00000555541 SLC8B1Q6J4K2 584 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 SLC16A14Q7RTX9 510 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 TMEM25Q86YD3 366 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 EIF4E3Q8N5X7 224 aaKnown RBP0.79□□□□□ -2.28
SNX6-204ENST00000555541 OR10W1Q8NGF6 305 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 OR5K2Q8NHB8 316 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 KCNG3Q8TAE7 436 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 ZNF75AQ96N20 296 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 TMEM38AQ9H6F2 299 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 OR2S2Q9NQN1 319 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 CA10Q9NS85 328 aa0.79□□□□□ -2.28
SNX6-204ENST00000555541 RBFOX1Q9NWB1 397 aaKnown RBP0.79□□□□□ -2.28
SNX6-204ENST00000555541 IGKV1OR2-108A0A075B7D4 117 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 A0A0A6YYD5 115 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 TRBV9A0A0B4J1U6 114 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 GGTLC3B5MD39 225 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 CXCL11O14625 94 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 TRBV12-3P01733 135 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 NCF2P19878 526 aaPredicted RBP0.78□□□□□ -2.28
SNX6-204ENST00000555541 RAB4AP20338 218 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 APLNRP35414 380 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 GGT2P36268 569 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 MYCNOSP40205 109 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 PPICP45877 212 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 HNMTP50135 292 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 PPP1R7Q15435 360 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 C6orf99Q4VX62 202 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 Q6ZSA8 131 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 PPP1R42Q7Z4L9 355 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 LRRC8AQ8IWT6 810 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 CDH26Q8IXH8 852 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 OR7G2Q8NG99 324 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 OR9K2Q8NGE7 335 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 ACMSDQ8TDX5 336 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 TEAD3Q99594 435 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 EMC6Q9BV81 110 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 FAM60AQ9NP50 221 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 SLC17A4Q9Y2C5 497 aa0.78□□□□□ -2.28
SNX6-204ENST00000555541 CAB39Q9Y376 341 aaPredicted RBP0.78□□□□□ -2.28
SNX6-204ENST00000555541 BAZ1BQ9UIG0 1483 aaKnown RBP0.78□□□□□ -2.28
SNX6-204ENST00000555541 KMT2EQ8IZD2 1858 aa0.78□□□□□ -2.29
SNX6-204ENST00000555541 NUP205Q92621 2012 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 LOC102724200A0A096LPH7 203 aaPredicted RBP0.77□□□□□ -2.29
SNX6-204ENST00000555541 MYBPHLA2RUH7 354 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 M0R3G1 203 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 PSCAO43653 123 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 OR2J3O76001 311 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 P0DMU3 169 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 FAM231AP0DMU4 169 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 FAM231CP0DMU5 169 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 ZNF708P17019 499 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 PRPS1L1P21108 318 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 RRM2P31350 389 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 OR1G1P47890 313 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 LGALS7P47929 136 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 RAB10P61026 200 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 SELENBP1Q13228 472 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 TAF7Q15545 349 aaPredicted RBP0.77□□□□□ -2.29
SNX6-204ENST00000555541 C22orf42Q6IC83 251 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 LYPD6BQ8NI32 183 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.77□□□□□ -2.29
SNX6-204ENST00000555541 RBPMSQ93062 196 aaKnown RBP0.77□□□□□ -2.29
SNX6-204ENST00000555541 SGTBQ96EQ0 304 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 METTL7AQ9H8H3 244 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 TMEM165Q9HC07 324 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 STX18Q9P2W9 335 aaKnown RBP0.77□□□□□ -2.29
SNX6-204ENST00000555541 CES1P1Q9UKY3 287 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 LAMB2P55268 1798 aa0.77□□□□□ -2.29
SNX6-204ENST00000555541 H7C0C1 242 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 ENTPD6O75354 484 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 LSM8O95777 96 aaKnown RBP0.76□□□□□ -2.29
SNX6-204ENST00000555541 SERPINA3P01011 423 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 ATP5OP48047 213 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 RAB7AP51149 207 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 FABP6P51161 128 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 ACTR1AP61163 376 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 HSP90AB3PQ58FF7 597 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 CENPPQ6IPU0 288 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 NECAB1Q8N987 351 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 OR4A4PQ8NGN8 299 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 OR5P3Q8WZ94 311 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 PEBP4Q96S96 227 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 SFXN3Q9BWM7 321 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 BLOC1S6Q9UL45 172 aa0.76□□□□□ -2.29
SNX6-204ENST00000555541 PLXNA3P51805 1871 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 TRGV4A0A0C4DH28 118 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 TMEM72A0PK05 275 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 AP3B1O00203 1094 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 NME4O00746 187 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 SLC16A7O60669 478 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 IGHV3-53P01767 116 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 IL3RAP26951 378 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 KDSRQ06136 332 aa0.75□□□□□ -2.29
SNX6-204ENST00000555541 CUL2Q13617 745 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms