RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 AKAP1Q92667 903 aaKnown RBP eCLIP8.79□□□□□ -1
NEK9-205ENST00000555405 LRRC46Q96FV0 321 aa8.79□□□□□ -1
NEK9-205ENST00000555405 UFSP2Q9NUQ7 469 aa8.79□□□□□ -1
NEK9-205ENST00000555405 ING3Q9NXR8 418 aa8.79□□□□□ -1
NEK9-205ENST00000555405 TREM2Q9NZC2 230 aa8.79□□□□□ -1
NEK9-205ENST00000555405 AMDHD2Q9Y303 409 aa8.79□□□□□ -1
NEK9-205ENST00000555405 ABCA12Q86UK0 2595 aa8.79□□□□□ -1
NEK9-205ENST00000555405 UTP20O75691 2785 aaKnown RBP8.79□□□□□ -1
NEK9-205ENST00000555405 CD300LBA8K4G0 201 aa8.79□□□□□ -1
NEK9-205ENST00000555405 PDCD5O14737 125 aa8.79□□□□□ -1
NEK9-205ENST00000555405 NRASP01111 189 aa8.79□□□□□ -1
NEK9-205ENST00000555405 IL1AP01583 271 aa8.79□□□□□ -1
NEK9-205ENST00000555405 GRPP07492 148 aa8.79□□□□□ -1
NEK9-205ENST00000555405 BDKRB2P30411 391 aa8.79□□□□□ -1
NEK9-205ENST00000555405 DCTDP32321 178 aa8.79□□□□□ -1
NEK9-205ENST00000555405 MPV17P39210 176 aa8.79□□□□□ -1
NEK9-205ENST00000555405 NRN1LQ496H8 165 aa8.79□□□□□ -1
NEK9-205ENST00000555405 SLC22A6Q4U2R8 563 aa8.79□□□□□ -1
NEK9-205ENST00000555405 GLT8D1Q68CQ7 371 aa8.79□□□□□ -1
NEK9-205ENST00000555405 FDX2Q6P4F2 183 aa8.79□□□□□ -1
NEK9-205ENST00000555405 PRSS45Q7RTY3 260 aa8.79□□□□□ -1
NEK9-205ENST00000555405 LRP11Q86VZ4 500 aa8.79□□□□□ -1
NEK9-205ENST00000555405 CCDC36Q8IYA8 594 aa8.79□□□□□ -1
NEK9-205ENST00000555405 ZCCHC24Q8N2G6 241 aaKnown RBP8.79□□□□□ -1
NEK9-205ENST00000555405 LILRB4Q8NHJ6 448 aa8.79□□□□□ -1
NEK9-205ENST00000555405 NEUROG1Q92886 237 aa8.79□□□□□ -1
NEK9-205ENST00000555405 PLPPR2Q96GM1 343 aa8.79□□□□□ -1
NEK9-205ENST00000555405 ZCCHC4Q9H5U6 513 aa8.79□□□□□ -1
NEK9-205ENST00000555405 TRBV5-5A0A0J9YX44 114 aa8.79□□□□□ -1
NEK9-205ENST00000555405 A6NLC8 198 aa8.79□□□□□ -1
NEK9-205ENST00000555405 ZNF701M0R085 212 aaPredicted RBP8.79□□□□□ -1
NEK9-205ENST00000555405 XRCC2O43543 280 aa8.79□□□□□ -1
NEK9-205ENST00000555405 SPRY1O43609 319 aaPredicted RBP8.79□□□□□ -1
NEK9-205ENST00000555405 OTX1P32242 354 aaPredicted RBP8.79□□□□□ -1
NEK9-205ENST00000555405 MTNR1BP49286 362 aa8.79□□□□□ -1
NEK9-205ENST00000555405 ASCL1P50553 236 aa8.79□□□□□ -1
NEK9-205ENST00000555405 BSPH1Q075Z2 132 aa8.79□□□□□ -1
NEK9-205ENST00000555405 PDCD1Q15116 288 aa8.79□□□□□ -1
NEK9-205ENST00000555405 TMEM108Q6UXF1 575 aa8.79□□□□□ -1
NEK9-205ENST00000555405 RHOUQ7L0Q8 258 aa8.79□□□□□ -1
NEK9-205ENST00000555405 SLC25A46Q96AG3 418 aa8.79□□□□□ -1
NEK9-205ENST00000555405 BORCS8Q96FH0 119 aa8.79□□□□□ -1
NEK9-205ENST00000555405 RNF170Q96K19 258 aa8.79□□□□□ -1
NEK9-205ENST00000555405 SLIRPQ9GZT3 109 aaKnown RBP8.79□□□□□ -1
NEK9-205ENST00000555405 SMURF1Q9HCE7 757 aa8.79□□□□□ -1
NEK9-205ENST00000555405 ANKRD30BLA7E2S9 258 aa8.78□□□□□ -1
NEK9-205ENST00000555405 ZNF93P35789 620 aaPredicted RBP8.78□□□□□ -1
NEK9-205ENST00000555405 RAD52P43351 418 aa8.78□□□□□ -1
NEK9-205ENST00000555405 GPM6AP51674 278 aa8.78□□□□□ -1
NEK9-205ENST00000555405 UBE2V2Q15819 145 aa8.78□□□□□ -1
NEK9-205ENST00000555405 AWAT2Q6E213 333 aa8.78□□□□□ -1
NEK9-205ENST00000555405 ZNF627Q7L945 461 aa8.78□□□□□ -1
NEK9-205ENST00000555405 GALNT11Q8NCW6 608 aa8.78□□□□□ -1
NEK9-205ENST00000555405 PHF21AQ96BD5 680 aa8.78□□□□□ -1
NEK9-205ENST00000555405 PIK3IP1Q96FE7 263 aa8.78□□□□□ -1
NEK9-205ENST00000555405 C1QTNF5Q9BXJ0 243 aa8.78□□□□□ -1
NEK9-205ENST00000555405 BANF2Q9H503 90 aa8.78□□□□□ -1
NEK9-205ENST00000555405 LIN7BQ9HAP6 207 aa8.78□□□□□ -1
NEK9-205ENST00000555405 NOTOA8MTQ0 251 aa8.78□□□□□ -1
NEK9-205ENST00000555405 SMPD2O60906 423 aa8.78□□□□□ -1
NEK9-205ENST00000555405 CD53P19397 219 aa8.78□□□□□ -1
NEK9-205ENST00000555405 CD40P25942 277 aa8.78□□□□□ -1
NEK9-205ENST00000555405 RGS7BPQ6MZT1 257 aaPredicted RBP8.78□□□□□ -1
NEK9-205ENST00000555405 UNQ9370/PRO34162Q6UXP9 181 aa8.78□□□□□ -1
NEK9-205ENST00000555405 C1orf162Q8NEQ5 155 aaPredicted RBP8.78□□□□□ -1
NEK9-205ENST00000555405 LGALS14Q8TCE9 139 aa8.78□□□□□ -1
NEK9-205ENST00000555405 KLF14Q8TD94 323 aaPredicted RBP8.78□□□□□ -1
NEK9-205ENST00000555405 TNFAIP8L1Q8WVP5 186 aa8.78□□□□□ -1
NEK9-205ENST00000555405 ZMAT3Q9HA38 289 aaKnown RBP8.78□□□□□ -1
NEK9-205ENST00000555405 TMEM138Q9NPI0 162 aa8.78□□□□□ -1
NEK9-205ENST00000555405 PLEKHB1Q9UF11 243 aaPredicted RBP8.78□□□□□ -1
NEK9-205ENST00000555405 SLC7A11Q9UPY5 501 aa8.78□□□□□ -1
NEK9-205ENST00000555405 LRBAP50851 2863 aa8.78□□□□□ -1
NEK9-205ENST00000555405 DPRXA6NFQ7 191 aa8.78□□□□□ -1
NEK9-205ENST00000555405 SPRY3O43610 288 aa8.78□□□□□ -1
NEK9-205ENST00000555405 GMDSO60547 372 aa8.78□□□□□ -1
NEK9-205ENST00000555405 PLAUP00749 431 aa8.78□□□□□ -1
NEK9-205ENST00000555405 SCN1BQ07699 218 aa8.78□□□□□ -1
NEK9-205ENST00000555405 NKPD1Q17RQ9 610 aa8.78□□□□□ -1
NEK9-205ENST00000555405 ZNF718Q3SXZ3 478 aa8.78□□□□□ -1
NEK9-205ENST00000555405 ASPHD2Q6ICH7 369 aa8.78□□□□□ -1
NEK9-205ENST00000555405 FAM131AQ6UXB0 335 aa8.78□□□□□ -1
NEK9-205ENST00000555405 CHST4Q8NCG5 386 aa8.78□□□□□ -1
NEK9-205ENST00000555405 WBP1Q96G27 269 aa8.78□□□□□ -1
NEK9-205ENST00000555405 ELOVL5Q9NYP7 299 aa8.78□□□□□ -1
NEK9-205ENST00000555405 SPEF1Q9Y4P9 236 aa8.78□□□□□ -1
NEK9-205ENST00000555405 SC5DO75845 299 aa8.77□□□□□ -1.01
NEK9-205ENST00000555405 IGKV3-15P01624 115 aa8.77□□□□□ -1.01
NEK9-205ENST00000555405 PTHLHP12272 177 aa8.77□□□□□ -1.01
NEK9-205ENST00000555405 PSG7Q13046 419 aa8.77□□□□□ -1.01
NEK9-205ENST00000555405 PLA2G7Q13093 441 aa8.77□□□□□ -1.01
NEK9-205ENST00000555405 RAB11BQ15907 218 aa8.77□□□□□ -1.01
NEK9-205ENST00000555405 SPANXN2Q5MJ10 180 aa8.77□□□□□ -1.01
NEK9-205ENST00000555405 DPPA2Q7Z7J5 298 aa8.77□□□□□ -1.01
NEK9-205ENST00000555405 OR8H2Q8N162 312 aa8.77□□□□□ -1.01
NEK9-205ENST00000555405 RNASE6Q93091 150 aaKnown RBP8.77□□□□□ -1.01
NEK9-205ENST00000555405 CRNNQ9UBG3 495 aaPredicted RBP8.77□□□□□ -1.01
NEK9-205ENST00000555405 USP9YO00507 2555 aaPredicted RBP8.77□□□□□ -1.01
NEK9-205ENST00000555405 A0A0U1RQV5 110 aa8.77□□□□□ -1.01
NEK9-205ENST00000555405 A0A1W2PP11 408 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms