RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 ETV7Q9Y603 341 aa8.57□□□□□ -1.04
PSEN1-213ENST00000555386 ANKRD17O75179 2603 aaKnown RBP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 DPRXA6NFQ7 191 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 CENPBD1B2RD01 187 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 DCTN6O00399 190 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 ABCD4O14678 606 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 PIN1P1O15428 100 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 MAGEB4O15481 346 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 ZNF254O75437 659 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 KHDRBS3O75525 346 aaKnown RBP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 DHFRP00374 187 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 HRGP04196 525 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 CD3EP07766 207 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 SNRPBP14678 240 aaKnown RBP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 CFPP27918 469 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 LAP3P28838 519 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 MNDAP41218 407 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 CCR9P51686 369 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 NANOS3P60323 173 aaKnown RBP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 RRAS2P62070 204 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 RAB1AP62820 205 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 MADCAM1Q13477 382 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 DAZAP2Q15038 168 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 CDK10Q15131 360 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 MEP1BQ16820 701 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 GSG1Q2KHT4 349 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 SLC36A2Q495M3 483 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 C4orf48Q5BLP8 95 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 C10orf128Q5T292 105 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 LIPNQ5VXI9 398 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 SLC22A25Q6T423 547 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 MYPOPQ86VE0 399 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 OR6V1Q8N148 313 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 TOMM5Q8N4H5 51 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 OR5H6Q8NGV6 325 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 SMIM4Q8WVI0 70 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 RAB40AQ8WXH6 277 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 NANOS1Q8WY41 292 aaKnown RBP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 AKAP1Q92667 903 aaKnown RBP eCLIP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 NEUROG1Q92886 237 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 YIPF5Q969M3 257 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 RNF170Q96K19 258 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 COMMD4Q9H0A8 199 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 ESRP2Q9H6T0 727 aaKnown RBP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 UBTD1Q9HAC8 227 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 PLEKHA1Q9HB21 404 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 RANGRFQ9HD47 186 aaPredicted RBP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 B9D1Q9UPM9 204 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 POLR1DQ9Y2S0 133 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 AK6Q9Y3D8 172 aaKnown RBP8.56□□□□□ -1.04
PSEN1-213ENST00000555386 V9GY05 133 aa8.56□□□□□ -1.04
PSEN1-213ENST00000555386 CSMD1Q96PZ7 3565 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 TRBV5-7A0A0A0MS05 114 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 IGHV1-18A0A0C4DH31 117 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 A0A1W2PPR1 153 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 C7orf66A4D0T2 115 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 NAP1L6A6NFF2 107 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 TVP23AA6NH52 213 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 PRR32B1ATL7 298 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 LANCL1O43813 399 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 ECDO95905 644 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-213ENST00000555386 C1QBP02746 253 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 GSTT2P0CG29 244 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 GSTT2BP0CG30 244 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 MSR1P21757 451 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 CCNOP22674 350 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 S100A1P23297 94 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 BTCP35070 178 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 AP3S2P59780 193 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 LINC01559Q495D7 138 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 TMEM53Q6P2H8 277 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 DNM1P34Q6PK57 102 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 LYPD4Q6UWN0 246 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 SEZ6L2Q6UXD5 910 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 TMEM108Q6UXF1 575 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 GLB1L2Q8IW92 636 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 OR6N2Q8NGY6 317 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 AKR7LQ8NHP1 331 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 OTOSQ8NHW6 89 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 LGALS14Q8TCE9 139 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 DEDD2Q8WXF8 326 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 RGP1Q92546 391 aaPredicted RBP8.55□□□□□ -1.04
PSEN1-213ENST00000555386 NABP1Q96AH0 204 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 C14orf79Q96F83 325 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 SLA2Q9H6Q3 261 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 TCF7L1Q9HCS4 588 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 ZNF224Q9NZL3 707 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 FRRS1LQ9P0K9 344 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 RNF115Q9Y4L5 304 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 ATP23Q9Y6H3 246 aa8.55□□□□□ -1.04
PSEN1-213ENST00000555386 USF3Q68DE3 2245 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 ARID1AO14497 2285 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 A0A1W2PPK0 400 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 OR4C45A6NMZ5 311 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 CECR9P0C854 216 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 CCL2P13500 99 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 ZNF32P17041 273 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 CD40P25942 277 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 CRABP1P29762 137 aa8.54□□□□□ -1.04
PSEN1-213ENST00000555386 ZNF133P52736 654 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms