RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 PTBP3O95758 552 aaKnown RBP10.78□□□□□ -0.68
SYNE2-219ENST00000555323 F12P00748 615 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-219ENST00000555323 CPEP16870 476 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 CELP19835 753 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 CA6P23280 308 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 EFNA4P52798 201 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 RPS11P62280 158 aaKnown RBP eCLIP10.78□□□□□ -0.68
SYNE2-219ENST00000555323 ODF4Q2M2E3 257 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 YIF1BQ5BJH7 314 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 ZNF367Q7RTV3 350 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 COMMD2Q86X83 199 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 BHLHE23Q8NDY6 225 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 OR51A4Q8NGJ6 313 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 RGP1Q92546 391 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-219ENST00000555323 FCGR1BQ92637 280 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 GTF3AQ92664 365 aaKnown RBP10.78□□□□□ -0.68
SYNE2-219ENST00000555323 SORCS2Q96PQ0 1159 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 VRK1Q99986 396 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-219ENST00000555323 ZNF275Q9NSD4 429 aaPredicted RBP10.78□□□□□ -0.68
SYNE2-219ENST00000555323 IL19Q9UHD0 177 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 ENPP5Q9UJA9 477 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 PIGLQ9Y2B2 252 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 APCP25054 2843 aa10.78□□□□□ -0.68
SYNE2-219ENST00000555323 A0A087WXM4 84 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 H0YL77 283 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 SPRY3O43610 288 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 ALX3O95076 343 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 ERCC1P07992 297 aaPredicted RBP10.77□□□□□ -0.69
SYNE2-219ENST00000555323 MAGEB1P43366 347 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 PTH2RP49190 550 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 MRPS11P82912 194 aaKnown RBP10.77□□□□□ -0.69
SYNE2-219ENST00000555323 SLC3A1Q07837 685 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 MAB21L1Q13394 359 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 FAM76BQ5HYJ3 339 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 SYT6Q5T7P8 510 aaPredicted RBP10.77□□□□□ -0.69
SYNE2-219ENST00000555323 CDH24Q86UP0 819 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 MS4A15Q8N5U1 240 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 PARP16Q8N5Y8 322 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 CELF2-AS1Q8N7Q2 184 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 ZFP41Q8N8Y5 198 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 TSPAN14Q8NG11 270 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 OR10AC1Q8NH08 325 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 GPR148Q8TDV2 347 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 OPALINQ96PE5 141 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 ABCB9Q9NP78 766 aa10.77□□□□□ -0.69
SYNE2-219ENST00000555323 USF3Q68DE3 2245 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 TRBV5-5A0A0J9YX44 114 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 NDUFS7O75251 213 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 HLA-DPB1P04440 258 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 FAHP16930 419 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 TNFSF4P23510 183 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 CD200P41217 278 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 GATA4P43694 442 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 TNFAIP6P98066 277 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-219ENST00000555323 CLVS2Q5SYC1 327 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 PRSS57Q6UWY2 283 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 UNQ9370/PRO34162Q6UXP9 181 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 UTS2BQ765I0 119 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 PHC2Q8IXK0 858 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 OR2Z1Q8NG97 314 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 UBASH3BQ8TF42 649 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 PP6455Q8WZ26 134 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 PIGCQ92535 297 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 UFD1Q92890 307 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 ITPKCQ96DU7 683 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 ADAT3Q96EY9 351 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-219ENST00000555323 ELMOD3Q96FG2 381 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 FOXC2Q99958 501 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 PAPOLGQ9BWT3 736 aaKnown RBP10.76□□□□□ -0.69
SYNE2-219ENST00000555323 CHST5Q9GZS9 411 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 TPK1Q9H3S4 243 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 PPP1R3EQ9H7J1 279 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 BARX1Q9HBU1 254 aaPredicted RBP10.76□□□□□ -0.69
SYNE2-219ENST00000555323 SF3B6Q9Y3B4 125 aaKnown RBP10.76□□□□□ -0.69
SYNE2-219ENST00000555323 LRBAP50851 2863 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 FLNBO75369 2602 aaKnown RBP10.76□□□□□ -0.69
SYNE2-219ENST00000555323 CSMD2Q7Z408 3487 aa10.76□□□□□ -0.69
SYNE2-219ENST00000555323 CENPEQ02224 2701 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 ZNF850A8MQ14 1090 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 LMX1BO60663 402 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 SC5DO75845 299 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 NCR1O76036 304 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 NRASP01111 189 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 IGHV4-39P01824 125 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 HPXP02790 462 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 HSMCR30P0CW71 290 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 TNFRSF1AP19438 455 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 GNALP38405 381 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 CRYBB2P43320 205 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 SRP9P49458 86 aaKnown RBP10.75□□□□□ -0.69
SYNE2-219ENST00000555323 ATP5J2P56134 94 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 CCL8P80075 99 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 MZT1Q08AG7 82 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 PRDX4Q13162 271 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 TESK1Q15569 626 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 OR8G1Q15617 311 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 CEACAM21Q3KPI0 293 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 Q499Y3 187 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 SPRNQ5BIV9 151 aa10.75□□□□□ -0.69
SYNE2-219ENST00000555323 ARMCX4Q5H9R4 360 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms