RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 YIF1BQ5BJH7 314 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 LRRC75A-AS1Q8N1F1 130 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 ZCCHC24Q8N2G6 241 aaKnown RBP12.16□□□□□ -0.46
CHD8-208ENST00000555301 ZFP41Q8N8Y5 198 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 TSPAN14Q8NG11 270 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 OR2Z1Q8NG97 314 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 GPR148Q8TDV2 347 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 GTF3AQ92664 365 aaKnown RBP12.16□□□□□ -0.46
CHD8-208ENST00000555301 GHSRQ92847 366 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 UFD1Q92890 307 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 ELMOD3Q96FG2 381 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 SORCS2Q96PQ0 1159 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 MGLLQ99685 303 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 ADAT1Q9BUB4 502 aaKnown RBP12.16□□□□□ -0.46
CHD8-208ENST00000555301 PAPOLGQ9BWT3 736 aaKnown RBP12.16□□□□□ -0.46
CHD8-208ENST00000555301 EGLN1Q9GZT9 426 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 BARX1Q9HBU1 254 aaPredicted RBP12.16□□□□□ -0.46
CHD8-208ENST00000555301 DECR2Q9NUI1 292 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 RHBDD3Q9Y3P4 386 aa12.16□□□□□ -0.46
CHD8-208ENST00000555301 ANXA2P2A6NMY6 339 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 TPD52L2O43399 206 aaKnown RBP12.15□□□□□ -0.46
CHD8-208ENST00000555301 F12P00748 615 aaPredicted RBP12.15□□□□□ -0.46
CHD8-208ENST00000555301 FAHP16930 419 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 PCMT1P22061 227 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 PTH2RP49190 550 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 EFNA4P52798 201 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 TNFAIP6P98066 277 aaPredicted RBP12.15□□□□□ -0.46
CHD8-208ENST00000555301 TPBGQ13641 420 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 DOC2BQ14184 412 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 UBE2UQ5VVX9 321 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 OR13C3Q8NGS6 347 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 PIGCQ92535 297 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 PGLYRP3Q96LB9 341 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 HIST1H2AAQ96QV6 131 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 HEATR1Q9H583 2144 aaKnown RBP12.15□□□□□ -0.46
CHD8-208ENST00000555301 IL19Q9UHD0 177 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 DHDHQ9UQ10 334 aa12.15□□□□□ -0.46
CHD8-208ENST00000555301 HRNRQ86YZ3 2850 aaPredicted RBP12.14□□□□□ -0.47
CHD8-208ENST00000555301 PNMA8CA0A1B0GUJ8 204 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 H3BSH0 61 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 MLNRO43193 412 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 SERPINA3P01011 423 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 HLA-DPB1P04440 258 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 CD2P06729 351 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 ZNF20P17024 532 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 TNFRSF1AP19438 455 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 MAGEB1P43366 347 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 SRP9P49458 86 aaKnown RBP12.14□□□□□ -0.47
CHD8-208ENST00000555301 ATP5J2P56134 94 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 CCL8P80075 99 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 PRDX4Q13162 271 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 TESK1Q15569 626 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 TSTQ16762 297 aaKnown RBP12.14□□□□□ -0.47
CHD8-208ENST00000555301 CLVS2Q5SYC1 327 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 ZDHHC23Q8IYP9 409 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 MS4A15Q8N5U1 240 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 CELF2-AS1Q8N7Q2 184 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 OR10AD1Q8NGE0 317 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 OR51A4Q8NGJ6 313 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 OR10AC1Q8NH08 325 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 OR8S1Q8NH09 359 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 TSEN15Q8WW01 171 aaKnown RBP12.14□□□□□ -0.47
CHD8-208ENST00000555301 PP6455Q8WZ26 134 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 PERPQ96FX8 193 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 OPALINQ96PE5 141 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 TECTBQ96PL2 329 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 MICU1Q9BPX6 476 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 SAP30LQ9HAJ7 183 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 VCX3AQ9NNX9 186 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 ZNF275Q9NSD4 429 aaPredicted RBP12.14□□□□□ -0.47
CHD8-208ENST00000555301 RTTNQ86VV8 2226 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 ROS1P08922 2347 aa12.14□□□□□ -0.47
CHD8-208ENST00000555301 ZNF850A8MQ14 1090 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 H0YL77 283 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 GATBO75879 557 aaKnown RBP12.13□□□□□ -0.47
CHD8-208ENST00000555301 NRASP01111 189 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 IGHV4-39P01824 125 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 OCM2P0CE71 109 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 CPEP16870 476 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 CD200P41217 278 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 MRPS11P82912 194 aaKnown RBP12.13□□□□□ -0.47
CHD8-208ENST00000555301 ARMCX4Q5H9R4 360 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 LIPKQ5VXJ0 399 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 TMEM42Q69YG0 159 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 KCTD8Q6ZWB6 473 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 RGP1Q92546 391 aaPredicted RBP12.13□□□□□ -0.47
CHD8-208ENST00000555301 THRSPQ92748 146 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 FGGYQ96C11 551 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 ITPKCQ96DU7 683 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 OR2V2Q96R30 315 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 RTL8AQ9BWD3 113 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 CHST5Q9GZS9 411 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 CXXC4Q9H2H0 198 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 MYOZ1Q9NP98 299 aaPredicted RBP12.13□□□□□ -0.47
CHD8-208ENST00000555301 C14orf119Q9NWQ9 140 aa12.13□□□□□ -0.47
CHD8-208ENST00000555301 PLCE1Q9P212 2302 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 TRBV5-5A0A0J9YX44 114 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 ANKRD61A6NGH8 418 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 F5H5P2 479 aa12.12□□□□□ -0.47
CHD8-208ENST00000555301 LMX1BO60663 402 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms