RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 OR2T2Q6IF00 324 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 PRSS3P2Q8NHM4 247 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ISL2Q96A47 359 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ALKBH3Q96Q83 286 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 OR2A14Q96R47 310 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ABHD14AQ9BUJ0 271 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 NBASA2RRP1 2371 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ORM1P02763 201 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 CD14P08571 375 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 HERVK_113P61574 105 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 CCL7P80098 99 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 TRMT12Q53H54 448 aaKnown RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 FNDC7Q5VTL7 733 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 NCR3LG1Q68D85 454 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF841Q6ZN19 808 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 OR11G2Q8NGC1 345 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 RHOFQ9HBH0 211 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 FAM24AA6NFZ4 105 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 EPXP11678 715 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 SLC51BQ86UW2 128 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 GPR150Q8NGU9 434 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 MRAP2Q96G30 205 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 PRDM14Q9GZV8 571 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 PDCD11Q14690 1871 aaKnown RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 A0A1B0GTQ1 180 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 CALCRP30988 508 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ACAA2P42765 397 aaKnown RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 DUSP6Q16828 381 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ZC3H3Q8IXZ2 948 aaKnown RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 A4GALTQ9NPC4 353 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 LAMP3Q9UQV4 416 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 TMEM30CPA0ZSE6 113 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 IDSB3KWA1 339 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 H0Y8X5 98 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 MRPS14O60783 128 aaKnown RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 FCGR3BO75015 233 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 RPLP1P05386 114 aaKnown RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 CLEC2LP0C7M8 214 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 VEZF1Q14119 521 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 PARM1Q6UWI2 310 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 LYG1Q8N1E2 194 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 CBARPQ8N350 705 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 OR1L3Q8NH93 324 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 Q96M85 177 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 SNED1Q8TER0 1413 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 CBR3O75828 277 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 UBL3O95164 117 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ATP1B1P05026 303 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 CHRM2P08172 466 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 LILRB4Q8NHJ6 448 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 AKR7LQ8NHP1 331 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 CLEC2DQ9UHP7 191 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 IVDP26440 423 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ADIPOQQ15848 244 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 RPEL1Q2QD12 228 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 NRARPQ7Z6K4 114 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 VN1R2Q8NFZ6 395 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 IP6K3Q96PC2 410 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ANKRD60Q9BZ19 345 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 LPAR2Q9HBW0 351 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 ASH2LQ9UBL3 628 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 IGKV3OR2-268A0A0C4DH90 116 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 C3orf80F5H4A9 247 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 XKR7Q5GH72 579 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 MORN1Q5T089 497 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 HTR3DQ70Z44 454 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 GPX8Q8TED1 209 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 CXorf36Q9H7Y0 433 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 SIRT3Q9NTG7 399 aaPredicted RBP6.24□□□□□ -1.41
SYNE2-216ENST00000555002 NDUFB11Q9NX14 153 aa6.24□□□□□ -1.41
SYNE2-216ENST00000555002 IGHV3OR16-12A0A075B7B8 117 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 H0YIV9 168 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 GPANK1O95872 356 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 CCKARP32238 428 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 UQCRFS1P47985 274 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF121P58317 390 aaPredicted RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 OR1C1Q15619 314 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 ETFDHQ16134 617 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 GUCA2BQ16661 112 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 PLK5Q496M5 336 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 CD276Q5ZPR3 534 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 RAB37Q96AX2 223 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 NKX6-2Q9C056 277 aaPredicted RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 RAB1BQ9H0U4 201 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 CHST8Q9H2A9 424 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 PRDM4Q9UKN5 801 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 COL9A3Q14050 684 aaPredicted RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 LINC00469Q8N7U9 141 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF740Q8NDX6 193 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 OR52L2PQ8NGH6 319 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 PHOSPHO2Q8TCD6 241 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 TXLNGYQ9BZA5 131 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 IL17CQ9P0M4 197 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 SLAMF8Q9P0V8 285 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 HAX1O00165 279 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 SNNO75324 88 aaPredicted RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 PRRX1P54821 245 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 ZNF683Q8IZ20 524 aa6.23□□□□□ -1.41
SYNE2-216ENST00000555002 EIF4E3Q8N5X7 224 aaKnown RBP6.23□□□□□ -1.41
SYNE2-216ENST00000555002 LRRC15Q8TF66 581 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms