RNA–Protein interactions for RNA: ENST00000554956.5

PSMC6-208, Transcript of proteasome 26S subunit, ATPase 6, human

TSL 3

Gene PSMC6, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC6-208	ENST00000554956	CASP8	Q14790	479 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZSWIM7	Q19AV6	140 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	SPANXN4	Q5MJ08	99 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	FAM120AOS	Q5T036	256 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZNF544	Q6NX49	715 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	CASP12	Q6UXS9	341 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	C16orf62	Q7Z3J2	963 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	GRINA	Q7Z429	371 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	RNF130	Q86XS8	419 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	WDFY1	Q8IWB7	410 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	LAX1	Q8IWV1	398 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZNF781	Q8N8C0	355 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR8J2	Q8NGG1	315 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	OR4A15	Q8NGL6	344 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	ZNF563	Q8TA94	476 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	PIGX	Q8TBF5	258 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	TMEM234	Q8WY98	164 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	ROPN1L	Q96C74	230 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	NEURL3	Q96EH8	262 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	AURKB	Q96GD4	344 aa	Predicted RBP	4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	SLC35G5	Q96KT7	338 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	SORT1	Q99523	831 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	BPESC1	Q9GZL8	116 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	FAIM	Q9NVQ4	179 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	EMC3	Q9P0I2	261 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	SEC14L4	Q9UDX3	406 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	LGALS13	Q9UHV8	139 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	MGAT4B	Q9UQ53	548 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	TRAPPC4	Q9Y296	219 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	TMED7	Q9Y3B3	224 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	RRP15	Q9Y3B9	282 aa	Known RBP	4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	HDGFL3	Q9Y3E1	203 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	WDR45	Q9Y484	360 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	PLCE1	Q9P212	2302 aa		4.22	□□□□□ -1.73
PSMC6-208	ENST00000554956	GPR171	O14626	319 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	SSX5	O60225	188 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	NPIPB7	O75200	414 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	ATP6V1G1	O75348	118 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	KHDRBS3	O75525	346 aa	Known RBP	4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	AK1	P00568	194 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	GUSB	P08236	651 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR4A8	P0C604	315 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	CECR9	P0C854	216 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	RPS4Y1	P22090	263 aa	Known RBP	4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	UQCRC2	P22695	453 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	MAGEA8	P43361	318 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	POLR2H	P52434	150 aa	Known RBP	4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	CLDN17	P56750	224 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	VSNL1	P62760	191 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	HOXC5	Q00444	222 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	CEACAM7	Q14002	265 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR7A5	Q15622	319 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	TRIP10	Q15642	601 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	CARTPT	Q16568	116 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	GPAT3	Q53EU6	434 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	PHYHD1	Q5SRE7	291 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	AAED1	Q7RTV5	226 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	COMTD1	Q86VU5	262 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	CARM1	Q86X55	608 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	VRK2	Q86Y07	508 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	KIRREL3	Q8IZU9	778 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	ARFGAP2	Q8N6H7	521 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	EIF1AD	Q8N9N8	165 aa	Known RBP	4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR9K2	Q8NGE7	335 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	OR1K1	Q8NGR3	316 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	PNPT1	Q8TCS8	783 aa	Known RBP	4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	TMEM45B	Q96B21	275 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	DOK1	Q99704	481 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	SLC35A5	Q9BS91	424 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	DPY30	Q9C005	99 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	NOX3	Q9HBY0	568 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	EXOSC3	Q9NQT5	275 aa	Known RBP	4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	CA10	Q9NS85	328 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	EXD2	Q9NVH0	621 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	NDUFA13	Q9P0J0	144 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956	SLC35A3	Q9Y2D2	325 aa		4.21	□□□□□ -1.74
PSMC6-208	ENST00000554956		A0A0J9YWU9	116 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	FTCDNL1	E5RQL4	147 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	FAAH	O00519	579 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZNF208	O43345	1280 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	STAMBP	O95630	424 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	NUDT17	P0C025	328 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	SLC1A3	P43003	542 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	PRPS1	P60891	318 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	ABCE1	P61221	599 aa	Known RBP	4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	SLC35A1	P78382	337 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	NAAA	Q02083	359 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	CHRNB3	Q05901	458 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	CHI3L2	Q15782	390 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	MRPL2	Q5T653	305 aa	Known RBP	4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	ATAD3B	Q5T9A4	648 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	PRAMEF7	Q5VXH5	474 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	SLC25A24	Q6NUK1	477 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	PAQR6	Q6TCH4	344 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	DLEU7	Q6UYE1	221 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZNF836	Q6ZNA1	936 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	LRRC74B	Q6ZQY2	392 aa		4.2	□□□□□ -1.74
PSMC6-208	ENST00000554956	ZER1	Q7Z7L7	766 aa		4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms