RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SPICQ8N5J4 248 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 TTC9Q92623 222 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 MARVELD1Q9BSK0 173 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 TINAGL1Q9GZM7 467 aaPredicted RBP12.57□□□□□ -0.4
VTI1B-204ENST00000554659 ST3GAL2Q16842 350 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 LSRQ86X29 649 aaPredicted RBP12.57□□□□□ -0.4
VTI1B-204ENST00000554659 SLC38A6Q8IZM9 456 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 OR5AS1Q8N127 324 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 ZNF596Q8TC21 504 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 LRP12Q9Y561 859 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 YTHDF2Q9Y5A9 579 aaKnown RBP12.57□□□□□ -0.4
VTI1B-204ENST00000554659 TOX4O94842 621 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 MYOGP15173 224 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 CCR2P41597 374 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 OR4C5Q8NGB2 326 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 PP6455Q8WZ26 134 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 THOC3Q96J01 351 aaKnown RBP12.57□□□□□ -0.4
VTI1B-204ENST00000554659 MAGT1Q9H0U3 335 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 IFT22Q9H7X7 185 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 PLEKHB1Q9UF11 243 aaPredicted RBP12.57□□□□□ -0.4
VTI1B-204ENST00000554659 A0A1W2PPH5 198 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 OR5H15A6NDH6 313 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 OR5H1A6NKK0 313 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 DBX1A6NMT0 343 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 NDUFB7P17568 137 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 COX5AP20674 150 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 FPR2P25090 351 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 RAB13P51153 203 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 AGFG1P52594 562 aaKnown RBP12.57□□□□□ -0.4
VTI1B-204ENST00000554659 PMP22Q01453 160 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 ZNF683Q8IZ20 524 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 NOXO1Q8NFA2 376 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 C11orf40Q8WZ69 217 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 PELI1Q96FA3 418 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 TECTBQ96PL2 329 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 MTFP1Q9UDX5 166 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 DHHO43323 396 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 HTRA3P83110 453 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 OSR2Q8N2R0 312 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 RDH5Q92781 318 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 HGDQ93099 445 aa12.57□□□□□ -0.4
VTI1B-204ENST00000554659 BARX1Q9HBU1 254 aaPredicted RBP12.57□□□□□ -0.4
VTI1B-204ENST00000554659 DOCK2Q92608 1830 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 MPPED2Q15777 294 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 FAM162BQ5T6X4 162 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 C6orf15Q6UXA7 325 aaPredicted RBP12.56□□□□□ -0.4
VTI1B-204ENST00000554659 OR2W3Q7Z3T1 314 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 OR1J1Q8NGS3 322 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 MMP25Q9NPA2 562 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 ST3GAL6Q9Y274 331 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 FAM166BA8MTA8 275 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 USF1P22415 310 aaPredicted RBP12.56□□□□□ -0.4
VTI1B-204ENST00000554659 SIGIRRQ6IA17 410 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 PRR27Q6MZM9 219 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 ZNF793Q6ZN11 406 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 ADGRG3Q86Y34 549 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 SLC39A7Q92504 469 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 ATOH1Q92858 354 aaPredicted RBP12.56□□□□□ -0.4
VTI1B-204ENST00000554659 CCDC74BQ96LY2 380 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 OR2J2O76002 312 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 SLC25A4P12235 298 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 GSG1Q2KHT4 349 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 ZDHHC23Q8IYP9 409 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 PSENENQ9NZ42 101 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 CACFD1Q9UGQ2 172 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 IGHV3-64DA0A0J9YX35 117 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 A0A1W2PPC4 97 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 PPM1DO15297 605 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 PCBP3P57721 371 aaKnown RBP12.56□□□□□ -0.4
VTI1B-204ENST00000554659 RPS23P62266 143 aaKnown RBP12.56□□□□□ -0.4
VTI1B-204ENST00000554659 FOXF1Q12946 379 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 C9orf152Q5JTZ5 239 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 CDC20BQ86Y33 519 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 AKR1E2Q96JD6 320 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 ADGRL4Q9HBW9 690 aa12.56□□□□□ -0.4
VTI1B-204ENST00000554659 C5orf49A4QMS7 147 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 SIRPB1O00241 398 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 TERTO14746 1132 aaKnown RBP12.55□□□□□ -0.4
VTI1B-204ENST00000554659 HSBP1O75506 76 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 RAB5AP20339 215 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 GPR12P47775 334 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 RANP62826 216 aaKnown RBP12.55□□□□□ -0.4
VTI1B-204ENST00000554659 SHHQ15465 462 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 OR4S1Q8NGB4 309 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 KTI12Q96EK9 354 aaPredicted RBP12.55□□□□□ -0.4
VTI1B-204ENST00000554659 LOC102723971A0A1B0GUV8 181 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 RNASEK-C17orf49H0YIS7 233 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 CLN3Q13286 438 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 Q1RN00 199 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 TMEM240Q5SV17 173 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 DUSP18Q8NEJ0 188 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 RCL1Q9Y2P8 373 aaKnown RBP12.55□□□□□ -0.4
VTI1B-204ENST00000554659 ABCD4O14678 606 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 PRKNO60260 465 aaPredicted RBP12.55□□□□□ -0.4
VTI1B-204ENST00000554659 AVPR2P30518 371 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 HLXQ14774 488 aaPredicted RBP12.55□□□□□ -0.4
VTI1B-204ENST00000554659 LILRA5A6NI73 299 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 SFTA3P0C7M3 94 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 CSF2RBP32927 897 aa12.55□□□□□ -0.4
VTI1B-204ENST00000554659 FUT6P51993 359 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms