RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 CNOT4O95628 575 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 IFNA4P05014 189 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 SPARCP09486 303 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 MAOAP21397 527 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 PTGER4P35408 488 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ACTR1BP42025 376 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 EIF1AXP47813 144 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CD81P60033 236 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 MXD1Q05195 221 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ZNF169Q14929 603 aaPredicted RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 SFRP4Q6FHJ7 346 aaPredicted RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 FIGNL1Q6PIW4 674 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ZSCAN2Q7Z7L9 614 aaPredicted RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 RPS19BP1Q86WX3 136 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 SPEM1Q8N4L4 309 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 TMEM234Q8WY98 164 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 C11orf40Q8WZ69 217 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ROBO4Q8WZ75 1007 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 EMG1Q92979 244 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 TSACCQ96A04 125 aaPredicted RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 C2orf50Q96LR7 162 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ZFP3Q96NJ6 502 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 GNRHR2Q96P88 292 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CST11Q9H112 138 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ELOVL3Q9HB03 270 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 HRASLS2Q9NWW9 162 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 METTL1Q9UBP6 276 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 GNG8Q9UK08 70 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 TMED3Q9Y3Q3 217 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 NPIPA5A0A0B4J1W7 369 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 NPIPA7E9PJI5 369 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 SCDO00767 359 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CLDN4O14493 209 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CEACAM4O75871 244 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ACTL6AO96019 429 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 NPIPA8P0DM63 369 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 OR8G3PP0DMU2 310 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 NTF4P34130 210 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ATP6V1E1P36543 226 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CFHR2P36980 270 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 SNCAP37840 140 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 NOVA1P51513 510 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 PAX9P55771 341 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 ID3Q02535 119 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 GLO1Q04760 184 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 SWI5Q1ZZU3 235 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 BSXQ3C1V8 233 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 MTFR2Q6P444 385 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 OPN5Q6U736 354 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 FJX1Q86VR8 437 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 WDR31Q8NA23 367 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 RELL2Q8NC24 303 aaPredicted RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 RNASEH2CQ8TDP1 164 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 DAZLQ92904 295 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 TMEM106AQ96A25 262 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CNTNAP3BQ96NU0 1288 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 NECAB3Q96P71 396 aaPredicted RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 PHF7Q9BWX1 381 aaPredicted RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CNTNAP3Q9BZ76 1288 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 H2AFY2Q9P0M6 372 aaPredicted RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 GRHPRQ9UBQ7 328 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 CDV3Q9UKY7 258 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 NOSIPQ9Y314 301 aaKnown RBP2.99□□□□□ -1.93
SEC23A-207ENST00000554615 GPSM3Q9Y4H4 160 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 HSPB11Q9Y547 144 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 UNC80Q8N2C7 3258 aa2.99□□□□□ -1.93
SEC23A-207ENST00000554615 IGHV5-10-1A0A0J9YXX1 117 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 LMX1BO60663 402 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 THEGLP0DJG4 465 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 ZNF35P13682 527 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 HLA-DOBP13765 273 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 CD38P28907 300 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 APLNRP35414 380 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 IDH3GP51553 393 aaPredicted RBP2.98□□□□□ -1.93
SEC23A-207ENST00000554615 DSCR4P56555 118 aaPredicted RBP2.98□□□□□ -1.93
SEC23A-207ENST00000554615 VSX2P58304 361 aaPredicted RBP2.98□□□□□ -1.93
SEC23A-207ENST00000554615 SLC3A1Q07837 685 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 PJVKQ0ZLH3 352 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 PPP1R1AQ13522 171 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 MEP1BQ16820 701 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 SFRP5Q5T4F7 317 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 DMRTA1Q5VZB9 504 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 PMS2CLQ68D20 193 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 PCSK4Q6UW60 755 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 B3GLCTQ6Y288 498 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 FAM90A1Q86YD7 464 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 SFTPA2Q8IWL1 248 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 TRIM48Q8IWZ4 208 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 OR51S1Q8NGJ8 323 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 LSM10Q969L4 123 aaKnown RBP2.98□□□□□ -1.93
SEC23A-207ENST00000554615 SLAMF6Q96DU3 332 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 PKIBQ9C010 78 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 NKX2-4Q9H2Z4 354 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 ATXN7L1Q9ULK2 861 aaPredicted RBP2.98□□□□□ -1.93
SEC23A-207ENST00000554615 ELOA3DA6NLF2 546 aaPredicted RBP2.98□□□□□ -1.93
SEC23A-207ENST00000554615 DISC1C4P0D8 188 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 K7EPK0 472 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 TNFRSF13BO14836 293 aaPredicted RBP2.98□□□□□ -1.93
SEC23A-207ENST00000554615 SDC3O75056 442 aa2.98□□□□□ -1.93
SEC23A-207ENST00000554615 SCAF4O95104 1147 aaKnown RBP2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms