RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 USP9YO00507 2555 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 LOC100509620A0A075B734 347 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 METTL15A6NJ78 407 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 H7C1Q1 480 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 J3QKU1 62 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 PHYHO14832 338 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 DOK2O60496 412 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 MRPS14O60783 128 aaKnown RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 ACTL6BO94805 426 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 UBL3O95164 117 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 PTHP01270 115 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 IGLV1-44P01699 117 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 SERPINA5P05154 406 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 RPSAP08865 295 aaKnown RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 CBR1P16152 277 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF14P17017 642 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 MYL12AP19105 171 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 PCMT1P22061 227 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 CRYGSP22914 178 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 OTX1P32242 354 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 ARR3P36575 388 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 CAPZA2P47755 286 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 OR12D2P58182 307 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 FAM3BP58499 235 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 UBE2NP61088 152 aaKnown RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 SORDQ00796 357 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 SCRN3Q0VDG4 424 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 SNTB1Q13884 538 aaKnown RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 PPA1Q15181 289 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 RAB35Q15286 201 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 TAB1Q15750 504 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 GSG1Q2KHT4 349 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 SLC36A2Q495M3 483 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 TP53I3Q53FA7 332 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 AWAT1Q58HT5 328 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 ELFN2Q5R3F8 820 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 OR2G6Q5TZ20 316 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 TMEM53Q6P2H8 277 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 ACSM6Q6P461 480 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 DEGS2Q6QHC5 323 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 LRRN1Q6UXK5 716 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 DPPA2Q7Z7J5 298 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 MYPOPQ86VE0 399 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 P2RY8Q86VZ1 359 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF584Q8IVC4 421 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF679Q8IYX0 411 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 NANOGP1Q8N7R0 232 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 BOLLQ8N9W6 283 aaKnown RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 TSPAN14Q8NG11 270 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 OR52N1Q8NH53 320 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 OR1F12Q8NHA8 337 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 SPRYD4Q8WW59 207 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 ASB17Q8WXJ9 295 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 HSD17B8Q92506 261 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 SLC7A6Q92536 515 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 RITA1Q96K30 269 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 C4orf36Q96KX1 117 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 WFIKKN1Q96NZ8 548 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 OR5M11Q96RB7 305 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 COQ7Q99807 217 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 ATF6BQ99941 703 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 C1QTNF6Q9BXI9 259 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 CCDC90BQ9GZT6 254 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 HDHD2Q9H0R4 259 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 KCNN2Q9H2S1 579 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 ISG20L2Q9H9L3 353 aaKnown RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 ELOVL3Q9HB03 270 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 CENPMQ9NSP4 180 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 PLEK2Q9NYT0 353 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 CRNNQ9UBG3 495 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 FBXL3Q9UKT7 428 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 AMDHD2Q9Y303 409 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 LSM2Q9Y333 95 aaKnown RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 CAB39Q9Y376 341 aaPredicted RBP5.42□□□□□ -1.54
SCFD1-212ENST00000554486 LRP12Q9Y561 859 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 DOPEY2Q9Y3R5 2298 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 DCHS2Q6V1P9 2916 aa5.42□□□□□ -1.54
SCFD1-212ENST00000554486 GCN1Q92616 2671 aaKnown RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 HRNRQ86YZ3 2850 aaPredicted RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 A0A087WXM4 84 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 IGHV1-18A0A0C4DH31 117 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 TMEM129A0AVI4 362 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 C5orf63A6NC05 138 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 MAGEA13PA6NCF6 341 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF878C9JN71 531 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 E9PI62 339 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 C19orf84I3L1E1 186 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 J3QLW9 94 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 ZNF254O75437 659 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 SRSF10O75494 262 aaKnown RBP5.41□□□□□ -1.54
SCFD1-212ENST00000554486 SULT1C4O75897 302 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 PNPP00491 289 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 LALBAP00709 142 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 IGKV3-15P01624 115 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 KRT8P05787 483 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 LCKP06239 509 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 H2BFMP0C1H6 154 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 ACSM4P0C7M7 580 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 CECR9P0C854 216 aa5.41□□□□□ -1.54
SCFD1-212ENST00000554486 COX5BP10606 129 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms