RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 LRRC42Q9Y546 428 aa14.06□□□□□ -0.16
NEK9-204ENST00000554258 SNTNA6NMZ2 147 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 MT-ND5P03915 603 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 SFTPBP07988 381 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 SLC15A1P46059 708 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 CXCR4P61073 352 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 RPS7P62081 194 aaKnown RBP14.05□□□□□ -0.16
NEK9-204ENST00000554258 PIGFQ07326 219 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 POU4F2Q12837 409 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 CCDC92Q53HC0 331 aaPredicted RBP14.05□□□□□ -0.16
NEK9-204ENST00000554258 ESCO2Q56NI9 601 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 TMEM53Q6P2H8 277 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 LRRN1Q6UXK5 716 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 SLC16A9Q7RTY1 509 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 SPICQ8N5J4 248 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 GJC3Q8NFK1 279 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 SYNPRQ8TBG9 265 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 LYSTQ99698 3801 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 OR2H1Q9GZK4 316 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 PATZ1Q9HBE1 687 aaKnown RBP14.05□□□□□ -0.16
NEK9-204ENST00000554258 FBXL3Q9UKT7 428 aa14.05□□□□□ -0.16
NEK9-204ENST00000554258 SELENOFO60613 162 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 SERPINA5P05154 406 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 COX5BP10606 129 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 DBTP11182 482 aaKnown RBP14.04□□□□□ -0.16
NEK9-204ENST00000554258 ALOX5APP20292 161 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 ZNF91Q05481 1191 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 SCRN3Q0VDG4 424 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 HERPUD1Q15011 391 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 SMN1Q16637 294 aaKnown RBP14.04□□□□□ -0.16
NEK9-204ENST00000554258 C6orf141Q5SZD1 244 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 GPR157Q5UAW9 335 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 DPY19L4Q7Z388 723 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 ERI1Q8IV48 349 aaKnown RBP14.04□□□□□ -0.16
NEK9-204ENST00000554258 ZNF584Q8IVC4 421 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 ZNF454Q8N9F8 522 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 OTOSQ8NHW6 89 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 MAP6Q96JE9 813 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 CNN2Q99439 309 aaKnown RBP14.04□□□□□ -0.16
NEK9-204ENST00000554258 MNTQ99583 582 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 CDADC1Q9BWV3 514 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 CCNB1IP1Q9NPC3 277 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 PNRC2Q9NPJ4 139 aaKnown RBP14.04□□□□□ -0.16
NEK9-204ENST00000554258 RPL36Q9Y3U8 105 aaKnown RBP14.04□□□□□ -0.16
NEK9-204ENST00000554258 NPTNQ9Y639 398 aa14.04□□□□□ -0.16
NEK9-204ENST00000554258 IGLV3-9A0A075B6K5 115 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 OR6C6A6NF89 314 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 RER1O15258 196 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 IGHV2-70P01814 119 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 CSNK2BP67870 215 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 KRTAP27-1Q3LI81 207 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 PABPC1L2AQ5JQF8 200 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 CORO6Q6QEF8 472 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 CPEB3Q8NE35 698 aaKnown RBP14.03□□□□□ -0.16
NEK9-204ENST00000554258 OR6N2Q8NGY6 317 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 LGALS12Q96DT0 336 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 ITPKCQ96DU7 683 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 RNFT2Q96EX2 444 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 B9D2Q9BPU9 175 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 Q9H521 79 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 RNF121Q9H920 327 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 AMBNQ9NP70 447 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 ATPIF1Q9UII2 106 aa14.03□□□□□ -0.16
NEK9-204ENST00000554258 RYR1P21817 5038 aa14.02□□□□□ -0.16
NEK9-204ENST00000554258 ZNF816-ZNF321PA0A0X1KG74 233 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 RAB36O95755 333 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 SPARCP09486 303 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 ZNF250P15622 560 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 NAA10P41227 235 aaPredicted RBP14.02□□□□□ -0.17
NEK9-204ENST00000554258 RPS27P42677 84 aaKnown RBP14.02□□□□□ -0.17
NEK9-204ENST00000554258 BPIFB3P59826 476 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 RAB40BQ12829 278 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 RAB39AQ14964 217 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 RSPO1Q2MKA7 263 aaPredicted RBP14.02□□□□□ -0.17
NEK9-204ENST00000554258 FAM209AQ5JX71 171 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 CFAP77Q6ZQR2 320 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 VASH1Q7L8A9 365 aaPredicted RBP14.02□□□□□ -0.17
NEK9-204ENST00000554258 DCXRQ7Z4W1 244 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.02□□□□□ -0.17
NEK9-204ENST00000554258 LINC00346Q8IVM7 164 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 OR51G2Q8NGK0 314 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 OR2AJ1Q8NGZ0 328 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 AKR7LQ8NHP1 331 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 RNF133Q8WVZ7 376 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 DCLRE1CQ96SD1 692 aaKnown RBP14.02□□□□□ -0.17
NEK9-204ENST00000554258 ABHD6Q9BV23 337 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 C1orf198Q9H425 327 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 FGF20Q9NP95 211 aaPredicted RBP14.02□□□□□ -0.17
NEK9-204ENST00000554258 FKBP14Q9NWM8 211 aa14.02□□□□□ -0.17
NEK9-204ENST00000554258 GAR1Q9NY12 217 aaKnown RBP14.02□□□□□ -0.17
NEK9-204ENST00000554258 SGCEO43556 437 aa14.01□□□□□ -0.17
NEK9-204ENST00000554258 PTHP01270 115 aa14.01□□□□□ -0.17
NEK9-204ENST00000554258 OR2T7P0C7T2 308 aa14.01□□□□□ -0.17
NEK9-204ENST00000554258 HCCSP53701 268 aa14.01□□□□□ -0.17
NEK9-204ENST00000554258 PLP2Q04941 152 aa14.01□□□□□ -0.17
NEK9-204ENST00000554258 DHRS7BQ6IAN0 325 aaPredicted RBP14.01□□□□□ -0.17
NEK9-204ENST00000554258 ZNF774Q6NX45 483 aa14.01□□□□□ -0.17
NEK9-204ENST00000554258 GDPGP1Q6ZNW5 385 aa14.01□□□□□ -0.17
NEK9-204ENST00000554258 SLC35F2Q8IXU6 374 aa14.01□□□□□ -0.17
NEK9-204ENST00000554258 ALDH16A1Q8IZ83 802 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms