RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 MGARPQ8TDB4 240 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 LRRC8CQ8TDW0 803 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 ADAMTS16Q8TE57 1224 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 AENQ8WTP8 325 aaKnown RBP2.54□□□□□ -2
SLIRP-202ENST00000553981 NPIPB3Q92617 1050 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 RORBQ92753 470 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 LHX4Q969G2 390 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 ZNF566Q969W8 418 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 TAMM41Q96BW9 452 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 HAVCR1Q96D42 359 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 SLC47A1Q96FL8 570 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 ZIM3Q96PE6 472 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 LYSTQ99698 3801 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 PCGF1Q9BSM1 259 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 BCL2L14Q9BZR8 327 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 TSPYL1Q9H0U9 437 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 RAD21L1Q9H4I0 556 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 SIAEQ9HAT2 523 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 BEX1Q9HBH7 125 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 PNRC2Q9NPJ4 139 aaKnown RBP2.54□□□□□ -2
SLIRP-202ENST00000553981 POLE4Q9NR33 117 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 SDR39U1Q9NRG7 319 aaPredicted RBP2.54□□□□□ -2
SLIRP-202ENST00000553981 MAN2C1Q9NTJ4 1040 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 PTTG3PQ9NZH4 202 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 ZNRD1Q9P1U0 126 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 IL19Q9UHD0 177 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 SLC7A7Q9UM01 511 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 CORO2BQ9UQ03 480 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 ANGPT4Q9Y264 503 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 IFT52Q9Y366 437 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 SNX13Q9Y5W8 968 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 GMEB1Q9Y692 573 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 HERC2O95714 4834 aa2.54□□□□□ -2
SLIRP-202ENST00000553981 TRAV27A0A087WT01 109 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 A0A1B0GUS0 222 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 IQCMA0A1B0GVH7 501 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 OR6C6A6NF89 314 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 IQCF6A8MYZ5 107 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 ZNF879B4DU55 563 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 MCIDASD6RGH6 385 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 FBP2O00757 339 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 CDC42EP2O14613 210 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 FFAR1O14842 300 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 TIMM23O14925 209 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 RER1O15258 196 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 TIMM8AO60220 97 aaPredicted RBP2.53□□□□□ -2
SLIRP-202ENST00000553981 SLC22A3O75751 556 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 OR7A10O76100 309 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 TGDSO95455 350 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 MT-ATP6P00846 226 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 LHBP01229 141 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 GYPAP02724 150 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 CST2P09228 141 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 CSF1P09603 554 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 RPS2P15880 293 aaKnown RBP2.53□□□□□ -2
SLIRP-202ENST00000553981 CTLA4P16410 223 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 GTF2E2P29084 291 aaKnown RBP2.53□□□□□ -2
SLIRP-202ENST00000553981 RPS27P42677 84 aaKnown RBP2.53□□□□□ -2
SLIRP-202ENST00000553981 OR1E2P47887 323 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 MTNR1AP48039 350 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 PITPNBP48739 271 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 MRPL19P49406 292 aaKnown RBP2.53□□□□□ -2
SLIRP-202ENST00000553981 POLR2JP52435 117 aaKnown RBP2.53□□□□□ -2
SLIRP-202ENST00000553981 RGS8P57771 180 aaPredicted RBP2.53□□□□□ -2
SLIRP-202ENST00000553981 MTPNP58546 118 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 ZP1P60852 638 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 HSF2Q03933 536 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 STX3Q13277 289 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 SCARB2Q14108 478 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 LY6EQ16553 131 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 TMEM95Q3KNT9 176 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 SNAI3Q3KNW1 292 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 SLC36A2Q495M3 483 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 MMEL1Q495T6 779 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 ESCO2Q56NI9 601 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 MESTQ5EB52 335 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 GCNT6Q5T4J0 391 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 INTS11Q5TA45 600 aaKnown RBP2.53□□□□□ -2
SLIRP-202ENST00000553981 C1orf94Q6P1W5 598 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 CORO6Q6QEF8 472 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 TBPL2Q6SJ96 375 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 LRRN1Q6UXK5 716 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 RBMS3Q6XE24 437 aaKnown RBP2.53□□□□□ -2
SLIRP-202ENST00000553981 ZNF620Q6ZNG0 422 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 BTN2A1Q7KYR7 527 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 FAM122BQ7Z309 247 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 VMO1Q7Z5L0 202 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 IFT20Q8IY31 132 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 LINC00471Q8N535 108 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 SPICQ8N5J4 248 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 C11orf42Q8N5U0 333 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 TMEM86BQ8N661 226 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 GCSAMQ8N6F7 178 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 C10orf53Q8N6V4 93 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 LY6G5BQ8NDX9 201 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 BHLHE23Q8NDY6 225 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 VPS37AQ8NEZ2 397 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 OR8G5Q8NG78 346 aa2.53□□□□□ -2
SLIRP-202ENST00000553981 DNAJA4Q8WW22 397 aaPredicted RBP2.53□□□□□ -2
SLIRP-202ENST00000553981 LIPHQ8WWY8 451 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms