RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 FSTP19883 344 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 COX5AP20674 150 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 IGHV1-2P23083 117 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 AZGP1P25311 298 aaKnown RBP13.86□□□□□ -0.19
ACTN1-209ENST00000553659 RPS27P42677 84 aaKnown RBP13.86□□□□□ -0.19
ACTN1-209ENST00000553659 CAPZA1P52907 286 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 MZT2BQ6NZ67 158 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 FOXL2NBQ6ZUU3 175 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 OR6N1Q8NGY5 312 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 NANOS1Q8WY41 292 aaKnown RBP13.86□□□□□ -0.19
ACTN1-209ENST00000553659 TMEM106AQ96A25 262 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 ZNF775Q96BV0 537 aaPredicted RBP13.86□□□□□ -0.19
ACTN1-209ENST00000553659 SLAMF6Q96DU3 332 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 BRD7Q9NPI1 651 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 ETAA1Q9NY74 926 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 OR52A1Q9UKL2 312 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 HHLA2Q9UM44 414 aa13.86□□□□□ -0.19
ACTN1-209ENST00000553659 AK6Q9Y3D8 172 aaKnown RBP13.86□□□□□ -0.19
ACTN1-209ENST00000553659 IGKV1D-43A0A0B4J1Z2 117 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 SRSF10O75494 262 aaKnown RBP13.85□□□□□ -0.19
ACTN1-209ENST00000553659 UBL3O95164 117 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 PSKH1P11801 424 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 ZNF84P51523 738 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 GRB2P62993 217 aaKnown RBP13.85□□□□□ -0.19
ACTN1-209ENST00000553659 BAK1Q16611 211 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 BCL2L15Q5TBC7 163 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 ZNF100Q8IYN0 542 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 IL17RDQ8NFM7 739 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 RAB40AQ8WXH6 277 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 FOXN4Q96NZ1 517 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 OR2M2Q96R28 347 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 B3GAT2Q9NPZ5 323 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 POLE4Q9NR33 117 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 NPAP1Q9NZP6 1156 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 TBC1D24Q9ULP9 559 aa13.85□□□□□ -0.19
ACTN1-209ENST00000553659 ANK3Q12955 4377 aaKnown RBP13.85□□□□□ -0.19
ACTN1-209ENST00000553659 IGHV4-30-2A0A087WSY4 118 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 A0A096LNT2 108 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 TMEM269A0A1B0GVZ9 245 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 A0A1W2PPK0 400 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 OR5H1A6NKK0 313 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 CTDSPLO15194 276 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 SLC43A1O75387 559 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 MPZL1O95297 269 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 APOC1P02654 83 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 MSR1P21757 451 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 DSCR9P59020 149 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 MRPS10P82664 201 aaKnown RBP13.84□□□□□ -0.19
ACTN1-209ENST00000553659 ABLIM2Q6H8Q1 611 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 GDPD3Q7L5L3 318 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.84□□□□□ -0.19
ACTN1-209ENST00000553659 LRRTM1Q86UE6 522 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 C20orf196Q8IYI0 205 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 ZNF433Q8N7K0 673 aaPredicted RBP13.84□□□□□ -0.19
ACTN1-209ENST00000553659 NELFAQ9H3P2 528 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 SEC61A2Q9H9S3 476 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 CBLN4Q9NTU7 201 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 GTF2A1LQ9UNN4 478 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 MXRA5Q9NR99 2828 aa13.84□□□□□ -0.19
ACTN1-209ENST00000553659 E7EQL1 145 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 EIF4EP06730 217 aaKnown RBP13.83□□□□□ -0.2
ACTN1-209ENST00000553659 FAM157CP0CG43 387 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 HSD11B1P28845 292 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 SOX2P48431 317 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 PSMA6P60900 246 aaKnown RBP13.83□□□□□ -0.2
ACTN1-209ENST00000553659 TAF13Q15543 124 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 CARD17Q5XLA6 110 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 FBXW9Q5XUX1 488 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 GLT8D1Q68CQ7 371 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 C11orf71Q6IPW1 123 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 TMEM108Q6UXF1 575 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 CCBE1Q6UXH8 406 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-209ENST00000553659 LINC00346Q8IVM7 164 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 TMEM123Q8N131 208 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 PIAS4Q8N2W9 510 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-209ENST00000553659 NKAIN3Q8N8D7 197 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 CCDC54Q8NEL0 328 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 OR4M1Q8NGD0 313 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 HTRA1Q92743 480 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 RFT1Q96AA3 541 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 FOXRED1Q96CU9 486 aaPredicted RBP13.83□□□□□ -0.2
ACTN1-209ENST00000553659 DHRS9Q9BPW9 319 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 WACQ9BTA9 647 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 CACNG6Q9BXT2 260 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 ABCG5Q9H222 651 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 G6PC2Q9NQR9 355 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 CENPMQ9NSP4 180 aa13.83□□□□□ -0.2
ACTN1-209ENST00000553659 IGKV3D-15A0A087WSY6 115 aa13.82□□□□□ -0.2
ACTN1-209ENST00000553659 DHHO43323 396 aa13.82□□□□□ -0.2
ACTN1-209ENST00000553659 SULT1B1O43704 296 aa13.82□□□□□ -0.2
ACTN1-209ENST00000553659 PNPP00491 289 aa13.82□□□□□ -0.2
ACTN1-209ENST00000553659 SNRPBP14678 240 aaKnown RBP13.82□□□□□ -0.2
ACTN1-209ENST00000553659 PTAFRP25105 342 aa13.82□□□□□ -0.2
ACTN1-209ENST00000553659 MNDAP41218 407 aa13.82□□□□□ -0.2
ACTN1-209ENST00000553659 LOXL1Q08397 574 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-209ENST00000553659 MFGE8Q08431 387 aaPredicted RBP13.82□□□□□ -0.2
ACTN1-209ENST00000553659 RAB35Q15286 201 aa13.82□□□□□ -0.2
ACTN1-209ENST00000553659 TMEM249Q2WGJ8 235 aa13.82□□□□□ -0.2
ACTN1-209ENST00000553659 LRFN4Q6PJG9 635 aa13.82□□□□□ -0.2
ACTN1-209ENST00000553659 SLC22A25Q6T423 547 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms