RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 IFNL4K9M1U5 179 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 P2RY10O00398 339 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 FAM20BO75063 409 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 IGLV3-1P01715 115 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 IGHV2-70P01814 119 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 GRPP07492 148 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 PMELP40967 661 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 GATA4P43694 442 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 MAP2K3P46734 347 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 OR12D2P58182 307 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 MZT1Q08AG7 82 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 RAB40BQ12829 278 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 PRDX4Q13162 271 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 LHFPL3Q86UP9 236 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 C8orf59Q8N0T1 100 aaPredicted RBP19.22■□□□□ 0.67
TDP1-206ENST00000553569 SEMA6DQ8NFY4 1073 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 OR11L1Q8NGX0 322 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 ALG8Q9BVK2 526 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 FN3KRPQ9HA64 309 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 C14orf119Q9NWQ9 140 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 UBAP1Q9NZ09 502 aa19.22■□□□□ 0.67
TDP1-206ENST00000553569 ZNF816-ZNF321PA0A0X1KG74 233 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 A6NLC8 198 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 LRRC30A6NM36 301 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 ANXA2P2A6NMY6 339 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 H3BSH0 61 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 J3QLW9 94 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 ZNF205O95201 554 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 IRF2P14316 349 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 ZNF19P17023 458 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 AQP4P55087 323 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 ISL1P61371 349 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 BTG1P62324 171 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 KLHL22Q53GT1 634 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 WDR38Q5JTN6 314 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 THAP5Q7Z6K1 395 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 MRPL48Q96GC5 212 aaKnown RBP19.21■□□□□ 0.67
TDP1-206ENST00000553569 C4orf36Q96KX1 117 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 ZNF665Q9H7R5 613 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 PIGLQ9Y2B2 252 aa19.21■□□□□ 0.67
TDP1-206ENST00000553569 INAFM1C9JVW0 142 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 DHRS3O75911 302 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 CST4P01036 141 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 IGHA1P01876 353 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 FAHP16930 419 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 LMO4P61968 165 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 ACTA2P62736 377 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 ACTG2P63267 376 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 GALEQ14376 348 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 ZMYND11Q15326 602 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 ZDHHC23Q8IYP9 409 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 ERGIC1Q969X5 290 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 MICU1Q9BPX6 476 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 LPAR2Q9HBW0 351 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 MRPS18AQ9NVS2 196 aaKnown RBP19.2■□□□□ 0.66
TDP1-206ENST00000553569 MPC1Q9Y5U8 109 aa19.2■□□□□ 0.66
TDP1-206ENST00000553569 MALRD1Q5VYJ5 2156 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 hCG_1807616A0A1W2PRN6 198 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 FAM157AC9JC47 383 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 MTRF1O75570 445 aaKnown RBP19.19■□□□□ 0.66
TDP1-206ENST00000553569 ATP6V1B1P15313 513 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 CDH15P55291 814 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 RIPPLY1Q0D2K3 151 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 ZNF181Q2M3W8 571 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 FAM201AQ5SY85 155 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 KCTD20Q7Z5Y7 419 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 WDR86Q86TI4 376 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 C1orf87Q8N0U7 546 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 PRSS35Q8N3Z0 413 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 Q8TCH9 128 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 RAB39BQ96DA2 213 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 ITPKCQ96DU7 683 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 RTL8AQ9BWD3 113 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 ABCB9Q9NP78 766 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 INPP5EQ9NRR6 644 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 C1orf123Q9NWV4 160 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 ERVK13-1Q9NX77 482 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 HSPE1-MOB4S4R3N1 261 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 HIVEP2P31629 2446 aa19.19■□□□□ 0.66
TDP1-206ENST00000553569 A0A1B0GTI1 187 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 A0A1B0GVI7 797 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 A8MV72 311 aaPredicted RBP19.18■□□□□ 0.66
TDP1-206ENST00000553569 PTBP3O95758 552 aaKnown RBP19.18■□□□□ 0.66
TDP1-206ENST00000553569 TGFAP01135 160 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 IGHV2-5P01817 119 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 KIR3DL2P43630 455 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 HOXA4Q00056 320 aaPredicted RBP19.18■□□□□ 0.66
TDP1-206ENST00000553569 FAM166AQ6J272 317 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 ZNF826PQ6ZT77 177 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 KCTD8Q6ZWB6 473 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 DOK3Q7L591 496 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 BOLLQ8N9W6 283 aaKnown RBP19.18■□□□□ 0.66
TDP1-206ENST00000553569 LINC01356Q8N9X3 169 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 PLPP7Q8NBV4 271 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 HPSE2Q8WWQ2 592 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 TFAP2CQ92754 450 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 RNF166Q96A37 237 aaPredicted RBP19.18■□□□□ 0.66
TDP1-206ENST00000553569 PELI1Q96FA3 418 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 VCX3BQ9H321 246 aa19.18■□□□□ 0.66
TDP1-206ENST00000553569 ISG20L2Q9H9L3 353 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms