RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 H2BFMP0C1H6 154 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 DUX4L2P0CJ85 424 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 DUX4L3P0CJ86 424 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 DUX4L4P0CJ87 422 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 DUX4L5P0CJ88 424 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 DUX4L6P0CJ89 424 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 DUX4L7P0CJ90 424 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 GNALP38405 381 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 GMFBP60983 142 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 TEX36Q5VZQ5 186 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 DUX4L9Q6RFH8 374 aaPredicted RBP13.67□□□□□ -0.22
XRCC3-204ENST00000553361 SHFQ7M4L6 423 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 PRSS45Q7RTY3 260 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 OR52H1Q8NGJ2 320 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 THEM6Q8WUY1 208 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 SEH1LQ96EE3 360 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 LRGUKQ96M69 825 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 CCT8L2Q96SF2 557 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 CHID1Q9BWS9 393 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 PAPOLGQ9BWT3 736 aaKnown RBP13.67□□□□□ -0.22
XRCC3-204ENST00000553361 SIRPDQ9H106 197 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 RNPEPL1Q9HAU8 725 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 DUX4Q9UBX2 424 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 CMYA5Q8N3K9 4069 aa13.67□□□□□ -0.22
XRCC3-204ENST00000553361 IGHV1-69DA0A0B4J2H0 117 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 hCG_38984A0A1B0GV85 526 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 CDIPTO14735 213 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 CST1P01037 141 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 KNG1P01042 644 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 IGHV1-69P01742 117 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 RAP2AP10114 183 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 CFL1P23528 166 aaKnown RBP13.66□□□□□ -0.22
XRCC3-204ENST00000553361 OPRL1P41146 370 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 RAG2P55895 527 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 SRSF4Q08170 494 aaKnown RBP13.66□□□□□ -0.22
XRCC3-204ENST00000553361 PDCD1Q15116 288 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 KLHL12Q53G59 568 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 WDR38Q5JTN6 314 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 TREML4Q6UXN2 200 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 WDR82Q6UXN9 313 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 CD300LDQ6UXZ3 194 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.66□□□□□ -0.22
XRCC3-204ENST00000553361 TIGD4Q8IY51 512 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 OR4F5Q8NH21 305 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 CCDC124Q96CT7 223 aaKnown RBP13.66□□□□□ -0.22
XRCC3-204ENST00000553361 CLPTM1LQ96KA5 538 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 BEX1Q9HBH7 125 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 C1RLQ9NZP8 487 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 KAAG1Q9UBP8 84 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 RPUSD1Q9UJJ7 312 aaKnown RBP13.66□□□□□ -0.22
XRCC3-204ENST00000553361 MMP24Q9Y5R2 645 aa13.66□□□□□ -0.22
XRCC3-204ENST00000553361 DOCK11Q5JSL3 2073 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 GNGT2O14610 69 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 SELENOFO60613 162 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 MUC1P15941 1255 aaPredicted RBP13.65□□□□□ -0.22
XRCC3-204ENST00000553361 PAICSP22234 425 aaKnown RBP13.65□□□□□ -0.22
XRCC3-204ENST00000553361 CALB2P22676 271 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 NAA10P41227 235 aaPredicted RBP13.65□□□□□ -0.22
XRCC3-204ENST00000553361 RELBQ01201 579 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 IKZF1Q13422 519 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 GINS1Q14691 196 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 PLBD1Q6P4A8 553 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 TMEM86BQ8N661 226 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 SCCPDHQ8NBX0 429 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 CSNK2A3Q8NEV1 391 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 OR5T2Q8NGG2 359 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 TBC1D15Q8TC07 691 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 SSMEM1Q8WWF3 244 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 MICU1Q9BPX6 476 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 TAS2R1Q9NYW7 299 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 ONECUT1Q9UBC0 465 aa13.65□□□□□ -0.22
XRCC3-204ENST00000553361 A0A0U1RQK1 487 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 A0A1B0GUS0 222 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 ANXA2P2A6NMY6 339 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 PRR23D1E9PI22 279 aaPredicted RBP13.64□□□□□ -0.23
XRCC3-204ENST00000553361 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.64□□□□□ -0.23
XRCC3-204ENST00000553361 ACOT8O14734 319 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 NDUFB3O43676 98 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 TIPRLO75663 272 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 PRR23D2P0DMB1 279 aaPredicted RBP13.64□□□□□ -0.23
XRCC3-204ENST00000553361 T-ENOLP0DO92 83 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 PRB3Q04118 309 aaPredicted RBP13.64□□□□□ -0.23
XRCC3-204ENST00000553361 CDONQ4KMG0 1287 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 C17orf107Q6ZR85 190 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 SLC36A1Q7Z2H8 476 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 VMO1Q7Z5L0 202 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 TMEM179BQ7Z7N9 219 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 GALNT4Q8N4A0 578 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 FAM216BQ8N7L0 139 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 RPL3LQ92901 407 aaKnown RBP13.64□□□□□ -0.23
XRCC3-204ENST00000553361 SNTG1Q9NSN8 517 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 FAM53CQ9NYF3 392 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 PDP1Q9P0J1 537 aaPredicted RBP13.64□□□□□ -0.23
XRCC3-204ENST00000553361 DNAJB11Q9UBS4 358 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 PRPF19Q9UMS4 504 aaKnown RBP13.64□□□□□ -0.23
XRCC3-204ENST00000553361 POMT1Q9Y6A1 747 aa13.64□□□□□ -0.23
XRCC3-204ENST00000553361 ZNF850A8MQ14 1090 aa13.63□□□□□ -0.23
XRCC3-204ENST00000553361 IGHV4-59P01825 116 aa13.63□□□□□ -0.23
XRCC3-204ENST00000553361 LYNP07948 512 aa13.63□□□□□ -0.23
XRCC3-204ENST00000553361 IL5RAQ01344 420 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms