RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 TRAV8-7A0A075B6U6 113 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 TVP23AA6NH52 213 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 K7EN84 100 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 TRBV12-3P01733 135 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 OR5AL1P0C617 328 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 CYP24A1Q07973 514 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 DYNC1I2Q13409 638 aaKnown RBP3.22□□□□□ -1.89
SCFD1-209ENST00000553280 PNOCQ13519 176 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 USF2Q15853 346 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-209ENST00000553280 TNXAQ16473 311 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 MPV17L2Q567V2 206 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 FAM78AQ5JUQ0 283 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 EPGNQ6UW88 154 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 COPS6Q7L5N1 327 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 SLC16A13Q7RTY0 426 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 CA13Q8N1Q1 262 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 OR4D6Q8NGJ1 314 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 ZFAND1Q8TCF1 268 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 RXFP4Q8TDU9 374 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 CPB2Q96IY4 423 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 EMC6Q9BV81 110 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 FRMD8P1Q9BZ68 369 aaPredicted RBP3.22□□□□□ -1.89
SCFD1-209ENST00000553280 TREM1Q9NP99 234 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 CHMP5Q9NZZ3 219 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 CLEC2DQ9UHP7 191 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 VAX2Q9UIW0 290 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 ZNF222Q9UK12 451 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 ACOT9Q9Y305 439 aa3.22□□□□□ -1.89
SCFD1-209ENST00000553280 RSPH10B2B2RC85 870 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 BPY2O14599 106 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 RAD51BO15315 384 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 GLSO94925 669 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-209ENST00000553280 CST4P01036 141 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 APCSP02743 223 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 RSPH10BP0C881 870 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 CXCR1P25024 350 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 SPAM1P38567 509 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 DNASE1L1P49184 302 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 MTPNP58546 118 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 CDK5Q00535 292 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 IFITM3Q01628 133 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 SYCNQ0VAF6 134 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 STX3Q13277 289 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 SNRNP35Q16560 246 aaKnown RBP3.21□□□□□ -1.9
SCFD1-209ENST00000553280 SMUG1Q53HV7 270 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 FAHD1Q6P587 224 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 WDFY1Q8IWB7 410 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 SAXO1Q8IYX7 474 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 SLC7A5P1Q8MH63 180 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 SYCE1Q8N0S2 351 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 FLYWCH2Q96CP2 140 aaKnown RBP3.21□□□□□ -1.9
SCFD1-209ENST00000553280 CCDC124Q96CT7 223 aaKnown RBP3.21□□□□□ -1.9
SCFD1-209ENST00000553280 SMARCD1Q96GM5 515 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 CYYR1Q96J86 154 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 ATP6V1G3Q96LB4 118 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 ZNF382Q96SR6 550 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 SFXN3Q9BWM7 321 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 GGTLC1Q9BX51 225 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 FGF23Q9GZV9 251 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-209ENST00000553280 C6orf50Q9HD87 102 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 RBFOX1Q9NWB1 397 aaKnown RBP3.21□□□□□ -1.9
SCFD1-209ENST00000553280 RMND1Q9NWS8 449 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 ZNF223Q9UK11 482 aaPredicted RBP3.21□□□□□ -1.9
SCFD1-209ENST00000553280 PSG11Q9UQ72 335 aa3.21□□□□□ -1.9
SCFD1-209ENST00000553280 TDRD6O60522 2096 aaKnown RBP3.21□□□□□ -1.9
SCFD1-209ENST00000553280 ZNFX1Q9P2E3 1918 aaKnown RBP3.21□□□□□ -1.9
SCFD1-209ENST00000553280 ZNF608Q9ULD9 1512 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-209ENST00000553280 A0A1B0GW15 77 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 MYL12BO14950 172 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 PSPHP1O15172 72 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 POLR3GO15318 223 aaPredicted RBP3.2□□□□□ -1.9
SCFD1-209ENST00000553280 LIPCP11150 499 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 APLNRP35414 380 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 RPS9P46781 194 aaKnown RBP3.2□□□□□ -1.9
SCFD1-209ENST00000553280 GALR1P47211 349 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 PRLHRP49683 370 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 PPIDQ08752 370 aaKnown RBP3.2□□□□□ -1.9
SCFD1-209ENST00000553280 INCA1Q0VD86 236 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 XRCC4Q13426 336 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 NAB1Q13506 487 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 TMEM236Q5W0B7 351 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 WDR86Q86TI4 376 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 MDP1Q86V88 176 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 RIMKLAQ8IXN7 391 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 Q8N9L7 120 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 OR4K5Q8NGD3 323 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 OR52P1PQ8NH57 321 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 OR1S1Q8NH92 325 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 NARS2Q96I59 477 aaKnown RBP3.2□□□□□ -1.9
SCFD1-209ENST00000553280 ZNF488Q96MN9 340 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 RBBP8Q99708 897 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 NDFIP1Q9BT67 221 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 PORCNQ9H237 461 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 OR52A5Q9H2C5 316 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 SLC38A10Q9HBR0 1119 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 HEBP1Q9NRV9 189 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 ZNF355PQ9NSJ1 428 aa3.2□□□□□ -1.9
SCFD1-209ENST00000553280 NDRG2Q9UN36 371 aaKnown RBP3.2□□□□□ -1.9
SCFD1-209ENST00000553280 TFR2Q9UP52 801 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms