RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 EXO5Q9H790 373 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 MRPL33O75394 65 aaKnown RBP12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 SYNGR4O95473 234 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 NAT2P11245 290 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 DNASE1P24855 282 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 PTGFRP43088 359 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 ALDH3B1P43353 468 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 MEOX1P50221 254 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 HGFACQ04756 655 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 MEF2DQ14814 521 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 FAM189A2Q15884 450 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 DMRTC1Q5HYR2 192 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 ATP1A1-AS1Q5TC04 95 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 TSPO2Q5TGU0 170 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 IDO2Q6ZQW0 420 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 SKA3Q8IX90 412 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 BPIFB2Q8N4F0 458 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 OR4S1Q8NGB4 309 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 NPRL2Q8WTW4 380 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 NUDCD2Q8WVJ2 157 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 SLC6A7Q99884 636 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 TMEM59Q9BXS4 323 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 LINC00470Q9BZP3 86 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 GHRLQ9UBU3 117 aa12.25□□□□□ -0.45
RAB3IP-216ENST00000552199 FREM2Q5SZK8 3169 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 A0A1W2PP11 408 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 UBE2QL1A1L167 161 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 DHRS7CA6NNS2 312 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 DISC1C4P0D8 188 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 KLRC4-KLRK1H3BQV0 150 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 SOCS1O15524 211 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 SSX5O60225 188 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 CRTAPO75718 401 aaPredicted RBP12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 GSTP1P09211 210 aaKnown RBP12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 CD82P27701 267 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 HTR5AP47898 357 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 RTN4RL2Q86UN3 420 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 GVQW1Q8N7I0 195 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 DEFB124Q8NES8 71 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 SEMA6DQ8NFY4 1073 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 OR2T35Q8NGX2 323 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 GRPEL2Q8TAA5 225 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 CHST6Q9GZX3 395 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 CA10Q9NS85 328 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 PARPBPQ9NWS1 579 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 PIPOXQ9P0Z9 390 aa12.24□□□□□ -0.45
RAB3IP-216ENST00000552199 A6NL46 340 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 G3V3Q6 166 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 LCATP04180 440 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 GIPP09681 153 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 FCGR2AP12318 317 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 MPZP25189 248 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 TMEM50BP56557 158 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 PPIAP62937 165 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 TGIF1Q15583 401 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 NRN1LQ496H8 165 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 SLC22A6Q4U2R8 563 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 PLAC9Q5JTB6 97 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 C1QL2Q7Z5L3 287 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 OR56B1Q8NGI3 324 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 HAS2Q92819 552 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 RAB3CQ96E17 227 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 REEP6Q96HR9 211 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 GPR137Q96N19 417 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 URM1Q9BTM9 101 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 CHIAQ9BZP6 476 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 POFUT1Q9H488 388 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 IFT46Q9NQC8 304 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 SLC2A8Q9NY64 477 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 MCTS1Q9ULC4 181 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 KCNK7Q9Y2U2 307 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 TMEM82A0PJX8 343 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 OR14I1A6ND48 311 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 ARGFXA6NJG6 315 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 OR2A4O95047 310 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 FARS2O95363 451 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 IGHV3-9P01782 118 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 MMP7P09237 267 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 FTH1P19P0C7X4 201 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 CD46P15529 392 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 HIST1H1DP16402 221 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 ACKR3P25106 362 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 RPS27AP62979 156 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 RNASE10Q5GAN6 216 aaKnown RBP12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 PLXDC2Q6UX71 529 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 TUSC5Q8IXB3 177 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 MUC20Q8N307 709 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 FAM89BQ8N5H3 189 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 OR5D18Q8NGL1 313 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 OR13C8Q8NGS7 320 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 OR2AE1Q8NHA4 323 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 CCDC107Q8WV48 283 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 OR2A7Q96R45 310 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 CST11Q9H112 138 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 RNF122Q9H9V4 155 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 MYOZ1Q9NP98 299 aaPredicted RBP12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 SLC7A10Q9NS82 523 aa12.23□□□□□ -0.45
RAB3IP-216ENST00000552199 CDRT15L2A8MXV6 281 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 GNG2P59768 71 aa12.22□□□□□ -0.45
RAB3IP-216ENST00000552199 RAP2BP61225 183 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms