RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 SSX3Q99909 188 aa17.65■□□□□ 0.42
SMARCD1-212ENST00000551966 MAB21L2Q9Y586 359 aa17.65■□□□□ 0.42
SMARCD1-212ENST00000551966 CAPN7Q9Y6W3 813 aa17.65■□□□□ 0.42
SMARCD1-212ENST00000551966 ANKRD30BLA7E2S9 258 aa17.64■□□□□ 0.41
SMARCD1-212ENST00000551966 ACSM1Q08AH1 577 aa17.64■□□□□ 0.41
SMARCD1-212ENST00000551966 SLC16A9Q7RTY1 509 aa17.64■□□□□ 0.41
SMARCD1-212ENST00000551966 OR51L1Q8NGJ5 315 aa17.64■□□□□ 0.41
SMARCD1-212ENST00000551966 RP9Q8TA86 221 aaKnown RBP17.64■□□□□ 0.41
SMARCD1-212ENST00000551966 H1FXQ92522 213 aaKnown RBP17.64■□□□□ 0.41
SMARCD1-212ENST00000551966 HOPXQ9BPY8 73 aaPredicted RBP17.64■□□□□ 0.41
SMARCD1-212ENST00000551966 COPS4Q9BT78 406 aa17.64■□□□□ 0.41
SMARCD1-212ENST00000551966 WDR13Q9H1Z4 485 aa17.64■□□□□ 0.41
SMARCD1-212ENST00000551966 SNTG1Q9NSN8 517 aa17.64■□□□□ 0.41
SMARCD1-212ENST00000551966 HAO2Q9NYQ3 351 aa17.64■□□□□ 0.41
SMARCD1-212ENST00000551966 XRCC2O43543 280 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 PAX6P26367 422 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 DGUOKQ16854 277 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 LRRC10Q5BKY1 277 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 C11orf88Q6PI97 169 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 ZNF788Q6ZQV5 615 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 ZDHHC21Q8IVQ6 265 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 CYB561A3Q8NBI2 242 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 OR9Q1Q8NGQ5 310 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 SLAMF6Q96DU3 332 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 TLNRD1Q9H1K6 362 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 MEGF9Q9H1U4 602 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 OPA3Q9H6K4 179 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 CENPMQ9NSP4 180 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 DCAF13Q9NV06 445 aaKnown RBP17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 FGFR1OP2Q9NVK5 253 aa17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 AURKAIP1Q9NWT8 199 aaPredicted RBP17.63■□□□□ 0.41
SMARCD1-212ENST00000551966 COX4I1P13073 169 aa17.62■□□□□ 0.41
SMARCD1-212ENST00000551966 NAA10P41227 235 aaPredicted RBP17.62■□□□□ 0.41
SMARCD1-212ENST00000551966 GSSP48637 474 aa17.62■□□□□ 0.41
SMARCD1-212ENST00000551966 GMFBP60983 142 aa17.62■□□□□ 0.41
SMARCD1-212ENST00000551966 KLHL12Q53G59 568 aa17.62■□□□□ 0.41
SMARCD1-212ENST00000551966 GLYATQ6IB77 296 aa17.62■□□□□ 0.41
SMARCD1-212ENST00000551966 PROKR2Q8NFJ6 384 aa17.62■□□□□ 0.41
SMARCD1-212ENST00000551966 GAFA1Q96PS6 74 aa17.62■□□□□ 0.41
SMARCD1-212ENST00000551966 METTL8Q9H825 291 aaKnown RBP17.62■□□□□ 0.41
SMARCD1-212ENST00000551966 ZNF391Q9UJN7 358 aa17.62■□□□□ 0.41
SMARCD1-212ENST00000551966 M0R1W7 72 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 TBX1O43435 398 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 TIPRLO75663 272 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 VSIG10L2P0DP72 767 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 KRT72Q14CN4 511 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 NCR3LG1Q68D85 454 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 ZNF511Q8NB15 262 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 OR4C13Q8NGP0 309 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 OR2T6Q8NHC8 308 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 DUS3LQ96G46 650 aaKnown RBP17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 RAB3IPQ96QF0 476 aaPredicted RBP17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 KCTD14Q9BQ13 255 aaPredicted RBP17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 DNTTIP1Q9H147 329 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 NECAP2Q9NVZ3 263 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 ZNF319Q9P2F9 582 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 RHBDD3Q9Y3P4 386 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 COMMD3-BMI1R4GMX3 469 aa17.61■□□□□ 0.41
SMARCD1-212ENST00000551966 SLC22A2O15244 555 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 GADD45GO95257 159 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 MXRA7P84157 204 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 TAF13Q15543 124 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 PRSS45Q7RTY3 260 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 OR4C15Q8NGM1 316 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 ANGPTL6Q8NI99 470 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 PIFOQ8TCI5 191 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 SGCDQ92629 289 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 REEP6Q96HR9 211 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 FAM234AQ9H0X4 552 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 MMP28Q9H239 520 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 RANBP3Q9H6Z4 567 aaPredicted RBP17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 EGLN3Q9H6Z9 239 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 SLC25A10Q9UBX3 287 aaPredicted RBP17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 DNAH3Q8TD57 4116 aa17.6■□□□□ 0.41
SMARCD1-212ENST00000551966 hCG_38984A0A1B0GV85 526 aa17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 ZNF593O00488 134 aaPredicted RBP17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 CHST1O43916 411 aa17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 SEMG1P04279 462 aa17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 SPARCP09486 303 aa17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 NSUN5P1Q3KNT7 163 aa17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 PGBD2Q6P3X8 592 aa17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 OR51G2Q8NGK0 314 aa17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 OR2T4Q8NH00 348 aa17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 RPL3LQ92901 407 aaKnown RBP17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 MED30Q96HR3 178 aa17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 ELL3Q9HB65 397 aaPredicted RBP17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 SF3B6Q9Y3B4 125 aaKnown RBP17.59■□□□□ 0.41
SMARCD1-212ENST00000551966 XPNPEP2O43895 674 aa17.58■□□□□ 0.4
SMARCD1-212ENST00000551966 ACAA1P09110 424 aaPredicted RBP17.58■□□□□ 0.4
SMARCD1-212ENST00000551966 CD28P10747 220 aa17.58■□□□□ 0.4
SMARCD1-212ENST00000551966 NDUFB7P17568 137 aa17.58■□□□□ 0.4
SMARCD1-212ENST00000551966 CX3CR1P49238 355 aa17.58■□□□□ 0.4
SMARCD1-212ENST00000551966 GSK3AP49840 483 aa17.58■□□□□ 0.4
SMARCD1-212ENST00000551966 ENTPD1P49961 510 aa17.58■□□□□ 0.4
SMARCD1-212ENST00000551966 SMIM11AP58511 58 aa17.58■□□□□ 0.4
SMARCD1-212ENST00000551966 SPIBQ01892 262 aa17.58■□□□□ 0.4
SMARCD1-212ENST00000551966 TSPAN31Q12999 210 aa17.58■□□□□ 0.4
SMARCD1-212ENST00000551966 LRRC75BQ2VPJ9 315 aa17.58■□□□□ 0.4
SMARCD1-212ENST00000551966 TEX30Q5JUR7 227 aa17.58■□□□□ 0.4
SMARCD1-212ENST00000551966 SLC37A3Q8NCC5 494 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms