RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 ARF1P84077 181 aaKnown RBP5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 IL5RAQ01344 420 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 HSF2Q03933 536 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 APOFQ13790 326 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 GGTLC2Q14390 218 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 PCK2Q16822 640 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 TEX30Q5JUR7 227 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 TIMM23BQ5SRD1 257 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 LINC01590Q5TEZ4 76 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 FAM27BQ5VT28 67 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 MEPCEQ7L2J0 689 aaKnown RBP5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 DPPA2Q7Z7J5 298 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 P2RY8Q86VZ1 359 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 SLC22A24Q8N4F4 322 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 PROKR2Q8NFJ6 384 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 STEAP2Q8NFT2 490 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 SLC26A10Q8NG04 563 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 OR9Q1Q8NGQ5 310 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 OR1K1Q8NGR3 316 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 APH1BQ8WW43 257 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 ZNRF4Q8WWF5 429 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 NSMAFQ92636 917 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 BCL2L2Q92843 193 aaPredicted RBP5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 NEUROG1Q92886 237 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 NABP1Q96AH0 204 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 ZNF582Q96NG8 517 aaPredicted RBP5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 MED18Q9BUE0 208 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 Q9H521 79 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 SIAEQ9HAT2 523 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 OBP2BQ9NPH6 170 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 POLE4Q9NR33 117 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 CLN6Q9NWW5 311 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 MGAT4CQ9UBM8 478 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 WARS2Q9UGM6 360 aaKnown RBP5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 KCNG2Q9UJ96 466 aa5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 PLECQ15149 4684 aaKnown RBP5.5□□□□□ -1.53
DEPDC4-210ENST00000551642 ARFGEF3Q5TH69 2177 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 CIB4A0PJX0 185 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 CCDC182A6NF36 153 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 OR5H1A6NKK0 313 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 C16orf97H3BN30 126 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 RGS10O43665 173 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 ENTPD6O75354 484 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 LYZL6O75951 148 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 INMTO95050 263 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 FARS2O95363 451 aaKnown RBP5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 SCGB1D2O95969 90 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 TGFAP01135 160 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 TFP02787 698 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 CST2P09228 141 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 MSR1P21757 451 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 IL32P24001 234 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 CDAP32320 146 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 PYCR1P32322 319 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 MTNR1AP48039 350 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 CDH11P55287 796 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 HILS1P60008 231 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 CXCR4P61073 352 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 CSNK2BP67870 215 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 HIST1H3AP68431 136 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 CFHR3Q02985 330 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 TBRG1Q3YBR2 411 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 KLHL12Q53G59 568 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 HIST2H3PS2Q5TEC6 136 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 LCN1P1Q5VSP4 162 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 AWAT2Q6E213 333 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 KLHL24Q6TFL4 600 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 HIST2H3AQ71DI3 136 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 BHLHA15Q7RTS1 189 aaPredicted RBP5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 KCTD20Q7Z5Y7 419 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 SKA3Q8IX90 412 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 TIGD4Q8IY51 512 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 ZNF525Q8N782 197 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 BBS1Q8NFJ9 593 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 OR51L1Q8NGJ5 315 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 OR6K6Q8NGW6 343 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 C11orf40Q8WZ69 217 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 OTULINQ96BN8 352 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 ACTR6Q9GZN1 396 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 OR51V1Q9H2C8 321 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 RERGLQ9H628 205 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 MOV10Q9HCE1 1003 aaKnown RBP5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 SLC17A5Q9NRA2 495 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 PLCXD1Q9NUJ7 323 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 MRPL22Q9NWU5 206 aaKnown RBP5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 B3GNT2Q9NY97 397 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 ZNF224Q9NZL3 707 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 DNAJC27Q9NZQ0 273 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 AMDHD2Q9Y303 409 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 LRRC42Q9Y546 428 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 COMMD3-BMI1R4GMX3 469 aa5.49□□□□□ -1.53
DEPDC4-210ENST00000551642 C12orf71A8MTZ7 269 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 TRIM77I1YAP6 450 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 J3QRE1 110 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 RAD51DO75771 328 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 SEC14L2O76054 403 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 UBL3O95164 117 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 MPZL1O95297 269 aa5.48□□□□□ -1.53
DEPDC4-210ENST00000551642 HLA-DQA2P01906 255 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms