RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 CYSLTR2Q9NS75 346 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 SLC17A7Q9P2U7 560 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 P2RX2Q9UBL9 471 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 ZMAT5Q9UDW3 170 aaKnown RBP2.91□□□□□ -1.94
LIMA1-206ENST00000550611 HAO1Q9UJM8 370 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 BLOC1S6Q9UL45 172 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 LYVE1Q9Y5Y7 322 aa2.91□□□□□ -1.94
LIMA1-206ENST00000550611 NUP214P35658 2090 aaPredicted RBP2.91□□□□□ -1.94
LIMA1-206ENST00000550611 IGKV1D-43A0A0B4J1Z2 117 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TRAV40A0A0B4J280 105 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 A0A0B4J2E0 115 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 CENPVL3A0A0U1RRI6 287 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 IQCMA0A1B0GVH7 501 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 A0A1B0GWJ7 208 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 A0A1B0GX12 115 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 hCG_1807616A0A1W2PRN6 198 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 PLSCR5A0PG75 271 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 CENPBD1B2RD01 187 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 GPR137BO60478 399 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TPST1O60507 370 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 MTRF1O75570 445 aaKnown RBP2.9□□□□□ -1.95
LIMA1-206ENST00000550611 RGS11O94810 467 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 FARS2O95363 451 aaKnown RBP2.9□□□□□ -1.95
LIMA1-206ENST00000550611 MT-ATP6P00846 226 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 THY1P04216 161 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 BCHEP06276 602 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 QDPRP09417 244 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TSPAN19P0C672 248 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 MYZAPP0CAP1 466 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 MMP9P14780 707 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 ETS2P15036 469 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 NQO1P15559 274 aaKnown RBP2.9□□□□□ -1.95
LIMA1-206ENST00000550611 LBPP18428 481 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 KITLGP21583 273 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TUBG1P23258 451 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 STOMP27105 288 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 GTF2E2P29084 291 aaKnown RBP2.9□□□□□ -1.95
LIMA1-206ENST00000550611 APLNRP35414 380 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 MDH2P40926 338 aaKnown RBP2.9□□□□□ -1.95
LIMA1-206ENST00000550611 PMELP40967 661 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 IER3P46695 156 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 F2RL1P55085 397 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 CDH12P55289 794 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 DSTNP60981 165 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 FGF12P61328 243 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 PPP1CBP62140 327 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 MRPS34P82930 218 aaKnown RBP2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TNFAIP6P98066 277 aaPredicted RBP2.9□□□□□ -1.95
LIMA1-206ENST00000550611 PSG4Q00888 419 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 COX10Q12887 443 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 RGNQ15493 299 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 OR1Q1Q15612 314 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 C2orf68Q2NKX9 166 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 SLC36A2Q495M3 483 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 GTDC1Q4AE62 458 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 ESCO2Q56NI9 601 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 PABPC1L2AQ5JQF8 200 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 PIK3CD-AS1Q5SR53 167 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 SPATA46Q5T0L3 261 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 C10orf128Q5T292 105 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 SLC27A4Q6P1M0 643 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 BTNL3Q6UXE8 466 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 BRD3OSQ6XYD6 125 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 ADAMTSL5Q6ZMM2 481 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 SLC35D2Q76EJ3 337 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 SLC16A14Q7RTX9 510 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 NOXA1Q86UR1 476 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 PARP16Q8N5Y8 322 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 ARL6IP6Q8N6S5 226 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TRIML2Q8N7C3 387 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 ZNF781Q8N8C0 355 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 DRAXINQ8NBI3 349 aaPredicted RBP2.9□□□□□ -1.95
LIMA1-206ENST00000550611 OR5J2Q8NH18 312 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TCP10LQ8TDR4 215 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TMEM170AQ8WVE7 144 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 SSMEM1Q8WWF3 244 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 SGCDQ92629 289 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 VPS33AQ96AX1 596 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 HAVCR1Q96D42 359 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 SLC47A1Q96FL8 570 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 THOC1Q96FV9 657 aaKnown RBP2.9□□□□□ -1.95
LIMA1-206ENST00000550611 OR52E6Q96RD3 313 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TBX15Q96SF7 602 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 SORT1Q99523 831 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 EPYCQ99645 322 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 SH3GL1Q99961 368 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 SLC30A2Q9BRI3 323 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TMEM246Q9BRR3 403 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 NPFFR1Q9GZQ6 430 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 WNT5BQ9H1J7 359 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 LRMDAQ9H2I8 198 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 ARMC7Q9H6L4 198 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 MEAF6Q9HAF1 191 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TPT1P8Q9HAU6 139 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 SCPEP1Q9HB40 452 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TUBG2Q9NRH3 451 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 TNFRSF19Q9NS68 423 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 MAN2C1Q9NTJ4 1040 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 AIG1Q9NVV5 245 aa2.9□□□□□ -1.95
LIMA1-206ENST00000550611 THUMPD1Q9NXG2 353 aaKnown RBP2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms