RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 HIDE1A8MVS5 230 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 H0YL77 283 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 CXCL1P09341 107 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 FMODQ06828 376 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 OR8G1Q15617 311 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 ZFP62Q8NB50 900 aaPredicted RBP10.78□□□□□ -0.68
VDR-208ENST00000550325 WFIKKN2Q8TEU8 576 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 ADOQ96SZ5 270 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 CYP8B1Q9UNU6 501 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 SEC16AO15027 2179 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 SEC14L6B5MCN3 397 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 FAM157AC9JC47 383 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 STMND1H3BQB6 276 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 NUDT21O43809 227 aaKnown RBP10.78□□□□□ -0.68
VDR-208ENST00000550325 CEBPBP17676 345 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 TUBG1P23258 451 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 PAX6P26367 422 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 PKIAP61925 76 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 KLHL24Q6TFL4 600 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 OPN5Q6U736 354 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 HEPN1Q6WQI6 88 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 POC1AQ8NBT0 407 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 C16orf52Q8NHV5 167 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 TCTN2Q96GX1 697 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 ARHGAP5-AS1Q96IT6 56 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 FAM71F1Q96KD3 344 aaPredicted RBP10.78□□□□□ -0.68
VDR-208ENST00000550325 SNX22Q96L94 193 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 ASB16Q96NS5 453 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 SCGB3A2Q96PL1 93 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 MRPL22Q9NWU5 206 aaKnown RBP10.78□□□□□ -0.68
VDR-208ENST00000550325 DNAJB11Q9UBS4 358 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 POMT1Q9Y6A1 747 aa10.78□□□□□ -0.68
VDR-208ENST00000550325 CDH23Q9H251 3354 aa10.77□□□□□ -0.68
VDR-208ENST00000550325 A0A1W2PQU0 124 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 CRABP1P29762 137 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 AFF3P51826 1226 aaKnown RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 SNU13P55769 128 aaKnown RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 SUPT4H1P63272 117 aaKnown RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 EGR4Q05215 589 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 PHF19Q5T6S3 580 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 CATSPERDQ86XM0 798 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 CA13Q8N1Q1 262 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 Q8WTZ3 238 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 ANKRD9Q96BM1 317 aaPredicted RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 RBM14Q96PK6 669 aaKnown RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 POLE3Q9NRF9 147 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 PRSS37A4D1T9 235 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 OR5H15A6NDH6 313 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 OR5H1A6NKK0 313 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 H3BQ15 152 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 CYR61O00622 381 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 IFNA10P01566 189 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 CTSBP07858 339 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 HOXC4P09017 264 aaPredicted RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 PPM1AP35813 382 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 LSM6P62312 80 aaKnown RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 TOMM20Q15388 145 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 AGBL4Q5VU57 503 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 SLC22A24Q8N4F4 322 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 CPNE4Q96A23 557 aaPredicted RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 MRPL24Q96A35 216 aaKnown RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 RAB39BQ96DA2 213 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 PACRGQ96M98 296 aaPredicted RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 MRPS28Q9Y2Q9 187 aaKnown RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 HIST1H2BKO60814 126 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 GNRH1P01148 92 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 HIST1H2BJP06899 126 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 HIST1H2BOP23527 126 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 HIST1H2BBP33778 126 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 SEC13P55735 322 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 HIST1H2BDP58876 126 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 FXYD4P59646 89 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 HIST1H2BCP62807 126 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 GLO1Q04760 184 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 UBE2V2Q15819 145 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 HIST2H2BEQ16778 126 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 GGNBP1Q5YKI7 109 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 CPEB2Q7Z5Q1 589 aaKnown RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 OR51T1Q8NGJ9 327 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 OR52N5Q8NH56 324 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 HIST1H2BHQ93079 126 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 SLC22A18Q96BI1 424 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 ADAT3Q96EY9 351 aaPredicted RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 HIST1H2BNQ99877 126 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 HIST1H2BMQ99879 126 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 LMF2Q9BU23 707 aaKnown RBP10.77□□□□□ -0.69
VDR-208ENST00000550325 TUBA4BQ9H853 241 aa10.77□□□□□ -0.69
VDR-208ENST00000550325 KIAA1549LQ6ZVL6 1849 aa10.76□□□□□ -0.69
VDR-208ENST00000550325 GEMIN2O14893 280 aaKnown RBP10.76□□□□□ -0.69
VDR-208ENST00000550325 BCKDHBP21953 392 aa10.76□□□□□ -0.69
VDR-208ENST00000550325 CTNNB1P35222 781 aa10.76□□□□□ -0.69
VDR-208ENST00000550325 RAB1AP62820 205 aa10.76□□□□□ -0.69
VDR-208ENST00000550325 CRIPAKQ8N1N5 446 aa10.76□□□□□ -0.69
VDR-208ENST00000550325 OR13G1Q8NGZ3 307 aa10.76□□□□□ -0.69
VDR-208ENST00000550325 NTNG2Q96CW9 530 aa10.76□□□□□ -0.69
VDR-208ENST00000550325 TMEM59Q9BXS4 323 aa10.76□□□□□ -0.69
VDR-208ENST00000550325 UBQLN4Q9NRR5 601 aa10.76□□□□□ -0.69
VDR-208ENST00000550325 PNO1Q9NRX1 252 aaKnown RBP10.76□□□□□ -0.69
VDR-208ENST00000550325 EFEMP2O95967 443 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms